RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 GDF11O95390 407 aa29.36■■■□□ 2.29
USP47-205ENST00000525257 NECAB2Q7Z6G3 386 aa29.36■■■□□ 2.29
USP47-205ENST00000525257 PALD1Q9ULE6 856 aa29.36■■■□□ 2.29
USP47-205ENST00000525257 ZKSCAN2Q63HK3 967 aa29.35■■■□□ 2.29
USP47-205ENST00000525257 P2RX7Q99572 595 aaKnown RBP29.35■■■□□ 2.29
USP47-205ENST00000525257 C1orf115Q9H7X2 142 aa29.35■■■□□ 2.29
USP47-205ENST00000525257 SAP30BPQ9UHR5 308 aaKnown RBP29.35■■■□□ 2.29
USP47-205ENST00000525257 SURF6O75683 361 aaKnown RBP29.34■■■□□ 2.29
USP47-205ENST00000525257 ZAP70P43403 619 aa29.34■■■□□ 2.29
USP47-205ENST00000525257 FOXP4Q8IVH2 680 aaPredicted RBP29.34■■■□□ 2.29
USP47-205ENST00000525257 SSH3Q8TE77 659 aa29.34■■■□□ 2.29
USP47-205ENST00000525257 HMX1Q9NP08 348 aaPredicted RBP29.34■■■□□ 2.29
USP47-205ENST00000525257 PIH1D3Q9NQM4 214 aaKnown RBP29.34■■■□□ 2.29
USP47-205ENST00000525257 RPTORQ8N122 1335 aa29.34■■■□□ 2.29
USP47-205ENST00000525257 HOXA7P31268 230 aaPredicted RBP29.33■■■□□ 2.29
USP47-205ENST00000525257 ATP8B2P98198 1209 aa29.33■■■□□ 2.29
USP47-205ENST00000525257 METTL16Q86W50 562 aaKnown RBP29.33■■■□□ 2.29
USP47-205ENST00000525257 TRIB2Q92519 343 aa29.33■■■□□ 2.29
USP47-205ENST00000525257 ZBTB21Q9ULJ3 1066 aa29.33■■■□□ 2.29
USP47-205ENST00000525257 USP17L10C9JJH3 530 aa29.32■■■□□ 2.28
USP47-205ENST00000525257 CYP2B6P20813 491 aa29.32■■■□□ 2.28
USP47-205ENST00000525257 HERVK_113P62684 666 aa29.32■■■□□ 2.28
USP47-205ENST00000525257 DYNLL1P63167 89 aaKnown RBP29.32■■■□□ 2.28
USP47-205ENST00000525257 ANKLE1Q8NAG6 615 aa29.32■■■□□ 2.28
USP47-205ENST00000525257 TXNRD2Q9NNW7 524 aa29.32■■■□□ 2.28
USP47-205ENST00000525257 STAP2Q9UGK3 403 aa29.32■■■□□ 2.28
USP47-205ENST00000525257 DDX60LQ5H9U9 1706 aaKnown RBP29.31■■■□□ 2.28
USP47-205ENST00000525257 C19orf81C9J6K1 198 aa29.31■■■□□ 2.28
USP47-205ENST00000525257 ZNF512BQ96KM6 892 aaPredicted RBP29.31■■■□□ 2.28
USP47-205ENST00000525257 TLR7Q9NYK1 1049 aaKnown RBP29.31■■■□□ 2.28
USP47-205ENST00000525257 DBNLQ9UJU6 430 aaKnown RBP29.31■■■□□ 2.28
USP47-205ENST00000525257 LAMA3Q16787 3333 aa29.31■■■□□ 2.28
USP47-205ENST00000525257 A0A1W2PPC1 479 aa29.3■■■□□ 2.28
USP47-205ENST00000525257 HLA-DOAP06340 250 aa29.3■■■□□ 2.28
USP47-205ENST00000525257 C7orf61Q8IZ16 206 aa29.3■■■□□ 2.28
USP47-205ENST00000525257 GPRC5AQ8NFJ5 357 aa29.3■■■□□ 2.28
USP47-205ENST00000525257 GINM1Q9NU53 330 aa29.3■■■□□ 2.28
USP47-205ENST00000525257 CYP7A1P22680 504 aa29.29■■■□□ 2.28
USP47-205ENST00000525257 CCDC8Q9H0W5 538 aaPredicted RBP29.29■■■□□ 2.28
USP47-205ENST00000525257 MYH1P12882 1939 aa29.29■■■□□ 2.28
USP47-205ENST00000525257 NUDT12Q9BQG2 462 aa29.28■■■□□ 2.28
USP47-205ENST00000525257 NBPF3Q9H094 633 aa29.28■■■□□ 2.28
USP47-205ENST00000525257 RBPJLQ9UBG7 517 aa29.28■■■□□ 2.28
USP47-205ENST00000525257 SOX1O00570 391 aaPredicted RBP29.27■■■□□ 2.28
USP47-205ENST00000525257 IDH1O75874 414 aaKnown RBP29.27■■■□□ 2.28
USP47-205ENST00000525257 PRKAR2AP13861 404 aaKnown RBP29.27■■■□□ 2.28
USP47-205ENST00000525257 MIGA1Q8NAN2 632 aa29.27■■■□□ 2.28
USP47-205ENST00000525257 SOCS4Q8WXH5 440 aa29.27■■■□□ 2.28
USP47-205ENST00000525257 PAGR1Q9BTK6 254 aa29.27■■■□□ 2.28
USP47-205ENST00000525257 ZMYND8Q9ULU4 1186 aaPredicted RBP29.27■■■□□ 2.28
USP47-205ENST00000525257 MNX1P50219 401 aaPredicted RBP29.26■■■□□ 2.27
USP47-205ENST00000525257 ERVK-9P63128 1117 aa29.26■■■□□ 2.27
USP47-205ENST00000525257 ERVK-24P63145 666 aa29.26■■■□□ 2.27
USP47-205ENST00000525257 PDE3AQ14432 1141 aa29.26■■■□□ 2.27
USP47-205ENST00000525257 FTSJ3Q8IY81 847 aaKnown RBP29.26■■■□□ 2.27
USP47-205ENST00000525257 EMILIN3Q9NT22 766 aa29.26■■■□□ 2.27
USP47-205ENST00000525257 NOP58Q9Y2X3 529 aaKnown RBP29.26■■■□□ 2.27
USP47-205ENST00000525257 IGSF3O75054 1194 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 GH2P01242 217 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 MAPK4P31152 587 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 Q3C1V9 767 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 MAP3K21Q5TCX8 1036 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 USP17L2Q6R6M4 530 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 ITPRIPQ8IWB1 547 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 CCAR1Q8IX12 1150 aaKnown RBP29.25■■■□□ 2.27
USP47-205ENST00000525257 EAF2Q96CJ1 260 aaPredicted RBP29.25■■■□□ 2.27
USP47-205ENST00000525257 LRCH3Q96II8 777 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 PORCNQ9H237 461 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 C11orf49Q9H6J7 331 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 OGDHLQ9ULD0 1010 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 NDUFB9Q9Y6M9 179 aa29.25■■■□□ 2.27
USP47-205ENST00000525257 XRCC5P13010 732 aaKnown RBP29.24■■■□□ 2.27
USP47-205ENST00000525257 USP5P45974 858 aa29.24■■■□□ 2.27
USP47-205ENST00000525257 ZYXQ15942 572 aaKnown RBP29.24■■■□□ 2.27
USP47-205ENST00000525257 ZKSCAN1P17029 563 aaPredicted RBP29.23■■■□□ 2.27
USP47-205ENST00000525257 MAGEB6Q8N7X4 407 aa29.23■■■□□ 2.27
USP47-205ENST00000525257 GTF3C2Q8WUA4 911 aaPredicted RBP29.23■■■□□ 2.27
USP47-205ENST00000525257 POTEEQ6S8J3 1075 aa29.22■■■□□ 2.27
USP47-205ENST00000525257 GPR142Q7Z601 462 aa29.22■■■□□ 2.27
USP47-205ENST00000525257 FEZ1Q99689 392 aa29.22■■■□□ 2.27
USP47-205ENST00000525257 GDF15Q99988 308 aa29.22■■■□□ 2.27
USP47-205ENST00000525257 RLBP1P12271 317 aa29.21■■■□□ 2.27
USP47-205ENST00000525257 SYN1P17600 705 aa29.21■■■□□ 2.27
USP47-205ENST00000525257 CACNB2Q08289 660 aaPredicted RBP29.21■■■□□ 2.27
USP47-205ENST00000525257 CCL14Q16627 93 aa29.21■■■□□ 2.27
USP47-205ENST00000525257 PLEKHH3Q7Z736 793 aa29.21■■■□□ 2.27
USP47-205ENST00000525257 TRMT44Q8IYL2 757 aaKnown RBP29.21■■■□□ 2.27
USP47-205ENST00000525257 USP6NLQ92738 828 aa29.21■■■□□ 2.27
USP47-205ENST00000525257 CWC22Q9HCG8 908 aaKnown RBP29.21■■■□□ 2.27
USP47-205ENST00000525257 RGS2P41220 211 aa29.2■■■□□ 2.26
USP47-205ENST00000525257 MORN1Q5T089 497 aa29.2■■■□□ 2.26
USP47-205ENST00000525257 TATDN1Q6P1N9 297 aa29.2■■■□□ 2.26
USP47-205ENST00000525257 ANTXR1Q9H6X2 564 aa29.2■■■□□ 2.26
USP47-205ENST00000525257 SERPINB13Q9UIV8 391 aa29.2■■■□□ 2.26
USP47-205ENST00000525257 RAB3GAP1Q15042 981 aa29.19■■■□□ 2.26
USP47-205ENST00000525257 CERS3Q8IU89 383 aa29.19■■■□□ 2.26
USP47-205ENST00000525257 PFASO15067 1338 aa29.19■■■□□ 2.26
USP47-205ENST00000525257 CCND3P30281 292 aaPredicted RBP29.18■■■□□ 2.26
USP47-205ENST00000525257 BMP8BP34820 402 aa29.18■■■□□ 2.26
USP47-205ENST00000525257 C12orf42Q96LP6 360 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms