RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GCC1Q96CN9 775 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 PARK7Q99497 189 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 EHD4Q9H223 541 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 AS3MTQ9HBK9 375 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 ZBTB21Q9ULJ3 1066 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 SLC4A4Q9Y6R1 1079 aa15.49■□□□□ 0.07
TRAPPC4-205ENST00000525079 DDX60LQ5H9U9 1706 aaKnown RBP15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 ADGRA2Q96PE1 1338 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 ERC2O15083 957 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 IGHDP01880 384 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 MX1P20591 662 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 SHMT1P34896 483 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 SOX10P56693 466 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 IRX6P78412 446 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 LACTBP83111 547 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 MTMR2Q13614 643 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 KIF22Q14807 665 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 CERKLQ49MI3 558 aaPredicted RBP15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 TATDN1Q6P1N9 297 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 WDR18Q9BV38 432 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 AGTPBP1Q9UPW5 1226 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 PTPN22Q9Y2R2 807 aa15.48■□□□□ 0.07
TRAPPC4-205ENST00000525079 CYP2D7A0A087X1C5 515 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 SMIM22K7EJ46 135 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 RNF113AO15541 343 aaKnown RBP15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 CTGFP29279 349 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 AAMPQ13685 434 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 PROCA1Q8NCQ7 364 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 SLC44A5Q8NCS7 719 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 OSBP2Q969R2 916 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 DYNLL2Q96FJ2 89 aa15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 BAZ2AQ9UIF9 1905 aaKnown RBP15.47■□□□□ 0.07
TRAPPC4-205ENST00000525079 SALL3Q9BXA9 1300 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 USP17L12C9JPN9 530 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 USP17L21D6R901 530 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 GLRX3O76003 335 aaKnown RBP15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 BACE1P56817 501 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 GABPAQ06546 454 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 RAB3GAP1Q15042 981 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 ARHGEF6Q15052 776 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 SH3D19Q5HYK7 790 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 STRBPQ96SI9 672 aaKnown RBP15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 ATP8A2Q9NTI2 1148 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 GINM1Q9NU53 330 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 SLC45A1Q9Y2W3 748 aa15.46■□□□□ 0.07
TRAPPC4-205ENST00000525079 LOC285556D6RIA3 1793 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 FMNL1O95466 1100 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 BCRP11274 1271 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 PSMC4P43686 418 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 ZYXQ15942 572 aaKnown RBP15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 APPBP2Q92624 585 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 CABP5Q9NP86 173 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 TMOD4Q9NZQ9 345 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 PTCH2Q9Y6C5 1203 aa15.45■□□□□ 0.06
TRAPPC4-205ENST00000525079 M0R2C6 588 aa15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 MPHOSPH10O00566 681 aaKnown RBP15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 C12orf60Q5U649 245 aa15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 ACER1Q8TDN7 264 aa15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 DDRGK1Q96HY6 314 aa15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 TRIM47Q96LD4 638 aa15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 SEC62Q99442 399 aaKnown RBP15.44■□□□□ 0.06
TRAPPC4-205ENST00000525079 C19orf81C9J6K1 198 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 ZFYP08048 801 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 OSBPP22059 807 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 GUCY1A2P33402 732 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 PDE1AP54750 535 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.065e-9■■□□□ 12.3
TRAPPC4-205ENST00000525079 SEPT2Q15019 361 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 CTR9Q6PD62 1173 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 SMC5Q8IY18 1101 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 STK11IPQ8N1F8 1099 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 ANKRD13CQ8N6S4 541 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 FEZ1Q99689 392 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 ASCC2Q9H1I8 757 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 EMILIN3Q9NT22 766 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 STAP2Q9UGK3 403 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 PNMA3Q9UL41 463 aa15.43■□□□□ 0.06
TRAPPC4-205ENST00000525079 GSG1L2A8MUP6 293 aa15.42■□□□□ 0.06
TRAPPC4-205ENST00000525079 GPAA1O43292 621 aa15.42■□□□□ 0.06
TRAPPC4-205ENST00000525079 CDK8P49336 464 aa15.42■□□□□ 0.06
TRAPPC4-205ENST00000525079 USP17L2Q6R6M4 530 aa15.42■□□□□ 0.06
TRAPPC4-205ENST00000525079 MINDY4BA8MYZ0 360 aa15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 PEX10O60683 326 aa15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 MYCP01106 439 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 APPP05067 770 aa15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 AKR1B1P15121 316 aa15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 FCGRTP55899 365 aa15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 LRRFIP1Q32MZ4 808 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 P2RX7Q99572 595 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-205ENST00000525079 SWAP70Q9UH65 585 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms