RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ENAHQ8N8S7 591 aaPredicted RBP11.58□□□□□ -0.56
VPS13B-212ENST00000524330 ANKS1AQ92625 1134 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 ZDHHC15Q96MV8 337 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 SLC26A6Q9BXS9 759 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 RNF26Q9BY78 433 aaPredicted RBP11.58□□□□□ -0.56
VPS13B-212ENST00000524330 GZF1Q9H116 711 aaPredicted RBP11.58□□□□□ -0.56
VPS13B-212ENST00000524330 INCENPQ9NQS7 918 aa11.58□□□□□ -0.56
VPS13B-212ENST00000524330 PRDM1O75626 825 aa11.57□□□□□ -0.56
VPS13B-212ENST00000524330 ADD1P35611 737 aaKnown RBP11.57□□□□□ -0.56
VPS13B-212ENST00000524330 RHBDL3P58872 404 aa11.57□□□□□ -0.56
VPS13B-212ENST00000524330 AOC3Q16853 763 aa11.57□□□□□ -0.56
VPS13B-212ENST00000524330 DACT2Q5SW24 774 aa11.57□□□□□ -0.56
VPS13B-212ENST00000524330 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
VPS13B-212ENST00000524330 OGFOD1Q8N543 542 aa11.57□□□□□ -0.56
VPS13B-212ENST00000524330 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
VPS13B-212ENST00000524330 SAP30BPQ9UHR5 308 aaKnown RBP11.57□□□□□ -0.56
VPS13B-212ENST00000524330 CYP2D6P10635 497 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 FDPSP14324 419 aaKnown RBP11.56□□□□□ -0.56
VPS13B-212ENST00000524330 CDK8P49336 464 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 SF3A1Q15459 793 aaKnown RBP11.56□□□□□ -0.56
VPS13B-212ENST00000524330 GRIK5Q16478 980 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 OLFM4Q6UX06 510 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 FAM177A1Q8N128 213 aaPredicted RBP11.56□□□□□ -0.56
VPS13B-212ENST00000524330 JMYQ8N9B5 988 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 NEDD1Q8NHV4 660 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 CCDC17Q96LX7 622 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
VPS13B-212ENST00000524330 PRPF3O43395 683 aaKnown RBP11.55□□□□□ -0.56
VPS13B-212ENST00000524330 ZBTB7AO95365 584 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 RXRAP19793 462 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 CDC27P30260 824 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 MRE11P49959 708 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 SCNN1DP51172 638 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 FOSBP53539 338 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 PICALMQ13492 652 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 NTRK3Q16288 839 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 FAM47AQ5JRC9 791 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 CCDC183Q5T5S1 534 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 SLC51AQ86UW1 340 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 KIAA0825Q8IV33 1275 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 CRACR2BQ8N4Y2 399 aaPredicted RBP11.55□□□□□ -0.56
VPS13B-212ENST00000524330 CERS5Q8N5B7 392 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 MYL10Q9BUA6 226 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 OSBPL5Q9H0X9 879 aaPredicted RBP11.55□□□□□ -0.56
VPS13B-212ENST00000524330 EHD4Q9H223 541 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 TACC3Q9Y6A5 838 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 KIF13BQ9NQT8 1826 aa11.55□□□□□ -0.56
VPS13B-212ENST00000524330 MYH1P12882 1939 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 ENTPD3O75355 529 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 YEATS4O95619 227 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 TOP1P11387 765 aaKnown RBP11.54□□□□□ -0.56
VPS13B-212ENST00000524330 RASA1P20936 1047 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 ZNF445P59923 1031 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 TNIP1Q15025 636 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 STK38Q15208 465 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 KRT40Q6A162 431 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 CDC42EP5Q6NZY7 148 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 RSBN1LQ6PCB5 846 aaPredicted RBP11.54□□□□□ -0.56
VPS13B-212ENST00000524330 FOXP4Q8IVH2 680 aaPredicted RBP11.54□□□□□ -0.56
VPS13B-212ENST00000524330 PNMA1Q8ND90 353 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 AGBL3Q8NEM8 1001 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 BICD2Q8TD16 824 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 KCNG4Q8TDN1 519 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 LEO1Q8WVC0 666 aaPredicted RBP11.54□□□□□ -0.56
VPS13B-212ENST00000524330 DYNLL2Q96FJ2 89 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 TAOK3Q9H2K8 898 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 GDPD2Q9HCC8 539 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 ZNRF3Q9ULT6 936 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
VPS13B-212ENST00000524330 ATF5Q9Y2D1 282 aaPredicted RBP11.54□□□□□ -0.56
VPS13B-212ENST00000524330 MYO1BO43795 1136 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 CALML3P27482 149 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 GUCY1B3Q02153 619 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 TROAPQ12815 778 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 ZSCAN23Q3MJ62 389 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 ZSCAN29Q8IWY8 852 aaPredicted RBP11.53□□□□□ -0.56
VPS13B-212ENST00000524330 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 CCDC12Q8WUD4 166 aaPredicted RBP11.53□□□□□ -0.56
VPS13B-212ENST00000524330 PHKBQ93100 1093 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 FOXP1Q9H334 677 aaPredicted RBP11.53□□□□□ -0.56
VPS13B-212ENST00000524330 SENP2Q9HC62 589 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
VPS13B-212ENST00000524330 DDX19AQ9NUU7 478 aaKnown RBP11.53□□□□□ -0.56
VPS13B-212ENST00000524330 RTEL1Q9NZ71 1219 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 PI4KBQ9UBF8 816 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 RCOR1Q9UKL0 485 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 NOL7Q9UMY1 257 aaKnown RBP11.53□□□□□ -0.56
VPS13B-212ENST00000524330 STX8Q9UNK0 236 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
VPS13B-212ENST00000524330 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
VPS13B-212ENST00000524330 BMP15O95972 392 aa11.52□□□□□ -0.57
VPS13B-212ENST00000524330 VIL1P09327 827 aaKnown RBP11.52□□□□□ -0.57
VPS13B-212ENST00000524330 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms