RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	KCNQ5	Q9NR82	932 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	HMG20B	Q9P0W2	317 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	PA2G4	Q9UQ80	394 aa	Known RBP	9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	HDAC5	Q9UQL6	1122 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	GOLGA6L6	A8MZA4	724 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	IGKV5-2	P06315	115 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	CLK2	P49760	499 aa	Known RBP	9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	ZNF75D	P51815	510 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	MAP2K1	Q02750	393 aa	Predicted RBP	9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	DMTN	Q08495	405 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	GRM1	Q13255	1194 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	ANKRD1	Q15327	319 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	MYSM1	Q5VVJ2	828 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	ANKRD18A	Q8IVF6	992 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	NECAB1	Q8N987	351 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	LINS1	Q8NG48	757 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	LEO1	Q8WVC0	666 aa	Predicted RBP	9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	TSC1	Q92574	1164 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	EAF2	Q96CJ1	260 aa	Predicted RBP	9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	ZFR	Q96KR1	1074 aa	Known RBP	9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	FAM227B	Q96M60	508 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	CBX8	Q9HC52	389 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	WBP1L	Q9NX94	342 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	PODXL2	Q9NZ53	605 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	GGA1	Q9UJY5	639 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	KIF3A	Q9Y496	699 aa		9.16	□□□□□ -0.94
SPIDR-223	ENST00000524033	ZNF609	O15014	1411 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	NUP98	P52948	1817 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	ECM29	Q5VYK3	1845 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	SHTN1	A0MZ66	631 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	VPS37C	A5D8V6	355 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	GRM8	O00222	908 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	ECE2	O60344	883 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	UFL1	O94874	794 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	CELF2	O95319	508 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	IFIT2	P09913	472 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	ZKSCAN1	P17029	563 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	PTGS1	P23219	599 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	RPS12	P25398	132 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	ECE1	P42892	770 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	CTCF	P49711	727 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	LCE2D	Q5TA82	110 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	LARP1B	Q659C4	914 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	BLOC1S2	Q6QNY1	142 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	SARM1	Q6SZW1	724 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	AACS	Q86V21	672 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	ANKK1	Q8NFD2	765 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	TTLL11	Q8NHH1	800 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	SPIRE2	Q8WWL2	714 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	PGBD1	Q96JS3	809 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	GPR101	Q96P66	508 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	GLIS2	Q9BZE0	524 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	SCAND2P	Q9GZW5	306 aa	Predicted RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	TLR7	Q9NYK1	1049 aa	Known RBP	9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	TAF6L	Q9Y6J9	622 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	TLL2	Q9Y6L7	1015 aa		9.15	□□□□□ -0.94
SPIDR-223	ENST00000524033	MYH7	P12883	1935 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	VIL1	P09327	827 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZSCAN20	P17040	1043 aa	Predicted RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	CTSW	P56202	376 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	OS9	Q13438	667 aa	Predicted RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	CWF19L2	Q2TBE0	894 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	DNTTIP2	Q5QJE6	756 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	CYP4F22	Q6NT55	531 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	SAPCD2	Q86UD0	394 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	SMARCC2	Q8TAQ2	1214 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	TRPM4	Q8TD43	1214 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	GTF3C6	Q969F1	213 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	CAPNS2	Q96L46	248 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	CDC5L	Q99459	802 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	BICC1	Q9H694	974 aa	Known RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZNF408	Q9H9D4	720 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	PRDM10	Q9NQV6	1147 aa		9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	9.14	□□□□□ -0.95
SPIDR-223	ENST00000524033	NEURL1B	A8MQ27	555 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	SMTNL1	A8MU46	457 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033		H7C1W4	665 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	TAF5L	O75529	589 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	CAVIN2	O95810	425 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	EGFR	P00533	1210 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	ATP2B4	P23634	1241 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	MAP2K2	P36507	400 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	RFX5	P48382	616 aa	Predicted RBP	9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	LBX1	P52954	281 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	GCKR	Q14397	625 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	KRT32	Q14532	448 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	IQCB1	Q15051	598 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	ATP2B3	Q16720	1220 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	KMT5B	Q4FZB7	885 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	ANO6	Q4KMQ2	910 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	RNF20	Q5VTR2	975 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	UBE3B	Q7Z3V4	1068 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	LUZP1	Q86V48	1076 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	DCPS	Q96C86	337 aa	Known RBP	9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	GREM2	Q9H772	168 aa		9.13	□□□□□ -0.95
SPIDR-223	ENST00000524033	KCND1	Q9NSA2	647 aa		9.13	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms