RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SEC62Q99442 399 aaKnown RBP15.03■□□□□ -0
VEGFA-225ENST00000523950 AFG3L2Q9Y4W6 797 aa15.03■□□□□ -0
VEGFA-225ENST00000523950 ROBO3Q96MS0 1386 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 USP17L5A8MUK1 530 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 SDSP20132 328 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 TDO2P48775 406 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 MFAP1P55081 439 aaKnown RBP15.02■□□□□ -0
VEGFA-225ENST00000523950 RRP1BQ14684 758 aaKnown RBP15.02■□□□□ -0
VEGFA-225ENST00000523950 CERKLQ49MI3 558 aaPredicted RBP15.02■□□□□ -0
VEGFA-225ENST00000523950 CTR9Q6PD62 1173 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 BRI3BPQ8WY22 251 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 ZBTB21Q9ULJ3 1066 aa15.02■□□□□ -0
VEGFA-225ENST00000523950 LOC285556D6RIA3 1793 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-225ENST00000523950 IGF2BP3O00425 579 aaKnown RBP eCLIP15.01□□□□□ -0.01
VEGFA-225ENST00000523950 TRPA1O75762 1119 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 APPP05067 770 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 GSPT1P15170 499 aaKnown RBP15.01□□□□□ -0.01
VEGFA-225ENST00000523950 SHMT1P34896 483 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 C16orf86Q6ZW13 317 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 FASTKD5Q7L8L6 764 aaKnown RBP15.01□□□□□ -0.01
VEGFA-225ENST00000523950 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-225ENST00000523950 IFNL3Q8IZI9 196 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 ZNF280CQ8ND82 737 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 CCDC17Q96LX7 622 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 WDR18Q9BV38 432 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 EPB41L4AQ9HCS5 686 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-225ENST00000523950 CABP5Q9NP86 173 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 DIAPH3Q9NSV4 1193 aa15.01□□□□□ -0.01
VEGFA-225ENST00000523950 CCDC171Q6TFL3 1326 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 A0A0D9SFI3 127 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 GDF11O95390 407 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 CYP2D6P10635 497 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 LBX1P52954 281 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 NMIQ13287 307 aaPredicted RBP15□□□□□ -0.01
VEGFA-225ENST00000523950 ABCB5Q2M3G0 1257 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 ANKRD23Q86SG2 305 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 FAM227BQ96M60 508 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 PTPN18Q99952 460 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 NAPBQ9H115 298 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 ZNF287Q9HBT7 754 aa15□□□□□ -0.01
VEGFA-225ENST00000523950 ZMYM6O95789 1325 aa14.99□□□□□ -0.01
VEGFA-225ENST00000523950 GH2P01242 217 aa14.99□□□□□ -0.01
VEGFA-225ENST00000523950 ALX1Q15699 326 aa14.99□□□□□ -0.01
VEGFA-225ENST00000523950 PROCA1Q8NCQ7 364 aaPredicted RBP14.99□□□□□ -0.01
VEGFA-225ENST00000523950 SLC45A1Q9Y2W3 748 aa14.99□□□□□ -0.01
VEGFA-225ENST00000523950 RAD50Q92878 1312 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 PCNTO95613 3336 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 TRIM75PA6NK02 468 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 C19orf81C9J6K1 198 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 BTBD19C9JJ37 291 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 SLC3A2P08195 630 aaKnown RBP14.98□□□□□ -0.01
VEGFA-225ENST00000523950 CDK8P49336 464 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 SPP2Q13103 211 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 SH3D19Q5HYK7 790 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 CCDC129Q6ZRS4 1044 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 TMEM179Q6ZVK1 233 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 PPP4R2Q9NY27 417 aa14.98□□□□□ -0.01
VEGFA-225ENST00000523950 CYP2D7A0A087X1C5 515 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 MINDY4BA8MYZ0 360 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 BACE1P56817 501 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 JAG1P78504 1218 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 MOGSQ13724 837 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-225ENST00000523950 FAM43AQ8N2R8 423 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 SLC44A5Q8NCS7 719 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 RUFY2Q8WXA3 655 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 ZFYVE28Q9HCC9 887 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.97□□□□□ -0.01
VEGFA-225ENST00000523950 TSKSQ9UJT2 592 aa14.97□□□□□ -0.01
VEGFA-225ENST00000523950 GREB1LQ9C091 1923 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-225ENST00000523950 USP17L10C9JJH3 530 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 FOXP2O15409 715 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 TBC1D8O95759 1140 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 HSPD1P10809 573 aaKnown RBP14.96□□□□□ -0.01
VEGFA-225ENST00000523950 EVX2Q03828 476 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 PDE4BQ07343 736 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 PPARAQ07869 468 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 PABPC4Q13310 644 aaKnown RBP eCLIP14.96□□□□□ -0.016e-13■■■■■ 112.3
VEGFA-225ENST00000523950 CWC27Q6UX04 472 aaKnown RBP14.96□□□□□ -0.01
VEGFA-225ENST00000523950 ZNF589Q86UQ0 364 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-225ENST00000523950 CCDC84Q86UT8 332 aaPredicted RBP14.96□□□□□ -0.01
VEGFA-225ENST00000523950 AGTPBP1Q9UPW5 1226 aa14.96□□□□□ -0.01
VEGFA-225ENST00000523950 LAMA4Q16363 1823 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 GPR25O00155 361 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 PDHXO00330 501 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 MPHOSPH10O00566 681 aaKnown RBP14.95□□□□□ -0.02
VEGFA-225ENST00000523950 USP14P54578 494 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 CRHR2Q13324 411 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 RAB3GAP1Q15042 981 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 BMP2KLQ5H9B9 411 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 VPS53Q5VIR6 699 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 GPAT2Q6NUI2 795 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 GADL1Q6ZQY3 521 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 C12orf42Q96LP6 360 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 PARK7Q99497 189 aaKnown RBP14.95□□□□□ -0.02
VEGFA-225ENST00000523950 MKNK2Q9HBH9 465 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 TMOD4Q9NZQ9 345 aa14.95□□□□□ -0.02
VEGFA-225ENST00000523950 ANAPC4Q9UJX5 808 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms