RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 LILRB5O75023 590 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 CDC27P30260 824 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF76P36508 570 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 COL9A3Q14050 684 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 GDF6Q6KF10 455 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 ILDR2Q71H61 639 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 TCP11L2Q8N4U5 519 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 PMFBP1Q8TBY8 1022 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 CLEC4MQ9H2X3 399 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 POLKQ9UBT6 870 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
LINC00534-203ENST00000523406 CDC42BPGQ6DT37 1551 aa8.38□□□□□ -1.07
LINC00534-203ENST00000523406 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF521Q96K83 1311 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 ADGRB2O60241 1585 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 WIPF1O43516 503 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 RRP1P56182 461 aaKnown RBP8.37□□□□□ -1.07
LINC00534-203ENST00000523406 SLFN5Q08AF3 891 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 RNF34Q969K3 372 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 NOC4LQ9BVI4 516 aaKnown RBP8.37□□□□□ -1.07
LINC00534-203ENST00000523406 SEC31BQ9NQW1 1179 aa8.37□□□□□ -1.07
LINC00534-203ENST00000523406 RRP7AQ9Y3A4 280 aaKnown RBP8.37□□□□□ -1.07
LINC00534-203ENST00000523406 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.37□□□□□ -1.07
LINC00534-203ENST00000523406 TTC21AQ8NDW8 1320 aa8.36□□□□□ -1.07
LINC00534-203ENST00000523406 EPHA1P21709 976 aa8.36□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
LINC00534-203ENST00000523406 IL22RA1Q8N6P7 574 aa8.36□□□□□ -1.07
LINC00534-203ENST00000523406 NECAB3Q96P71 396 aaPredicted RBP8.36□□□□□ -1.07
LINC00534-203ENST00000523406 ZNF142P52746 1687 aaPredicted RBP8.36□□□□□ -1.07
LINC00534-203ENST00000523406 ARHGEF15O94989 841 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 B3GALT4O96024 378 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 ESRRAP11474 423 aaPredicted RBP8.35□□□□□ -1.07
LINC00534-203ENST00000523406 NID1P14543 1247 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 AMPD1P23109 780 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 FBLN1P23142 703 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 DGKGP49619 791 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 DUSP27Q5VZP5 1158 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 TPTE2Q6XPS3 522 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 SV2BQ7L1I2 683 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.35□□□□□ -1.07
LINC00534-203ENST00000523406 CEP44Q9C0F1 390 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 ANKARQ7Z5J8 1434 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
LINC00534-203ENST00000523406 KIF20BQ96Q89 1820 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 H3BRJ5 948 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 FBXO24O75426 580 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
LINC00534-203ENST00000523406 RAD51AP2Q09MP3 1159 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 RRS1Q15050 365 aaKnown RBP8.34□□□□□ -1.07
LINC00534-203ENST00000523406 CCDC85BQ15834 202 aaPredicted RBP8.34□□□□□ -1.07
LINC00534-203ENST00000523406 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 MSL1Q68DK7 614 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 ERMP1Q7Z2K6 904 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 SVOPQ8N4V2 548 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 PPME1Q9Y570 386 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 USP6P35125 1406 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 PNPLA6Q8IY17 1366 aa8.34□□□□□ -1.07
LINC00534-203ENST00000523406 FAM177BA6PVY3 158 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
LINC00534-203ENST00000523406 ENC1O14682 589 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 CABP4P57796 275 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 ITSN1Q15811 1721 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 HS2ST1Q7LGA3 356 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 NT5DC4Q86YG4 428 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 WFDC8Q8IUA0 241 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 XRN1Q8IZH2 1706 aaKnown RBP8.33□□□□□ -1.08
LINC00534-203ENST00000523406 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 ENAMQ9NRM1 1142 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 ANKRD26Q9UPS8 1709 aa8.33□□□□□ -1.08
LINC00534-203ENST00000523406 CELA3AP09093 270 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 PRKAR2BP31323 418 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 IL13P35225 146 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 TMPOP42166 694 aaKnown RBP8.32□□□□□ -1.08
LINC00534-203ENST00000523406 RIPK4P57078 832 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 IKBKEQ14164 716 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 TRMT2AQ8IZ69 625 aaKnown RBP8.32□□□□□ -1.08
LINC00534-203ENST00000523406 NEDD1Q8NHV4 660 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 CCDC136Q96JN2 1154 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 PLEKHF1Q96S99 279 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
LINC00534-203ENST00000523406 RSRP1Q9BUV0 290 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 TMEM39AQ9NV64 488 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 GGT7Q9UJ14 662 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 SHPRHQ149N8 1683 aa8.32□□□□□ -1.08
LINC00534-203ENST00000523406 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
LINC00534-203ENST00000523406 LINC01387J3KSC0 135 aa8.31□□□□□ -1.08
LINC00534-203ENST00000523406 TM4SF5O14894 197 aa8.31□□□□□ -1.08
LINC00534-203ENST00000523406 PLIN1O60240 522 aa8.31□□□□□ -1.08
LINC00534-203ENST00000523406 HMOX1P09601 288 aa8.31□□□□□ -1.08
LINC00534-203ENST00000523406 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
LINC00534-203ENST00000523406 AMPHP49418 695 aa8.31□□□□□ -1.08
LINC00534-203ENST00000523406 WNT8BQ93098 351 aa8.31□□□□□ -1.08
LINC00534-203ENST00000523406 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
LINC00534-203ENST00000523406 GPN3Q9UHW5 284 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms