RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 PARP1P09874 1014 aaKnown RBP4.46□□□□□ -1.7
HDAC2-215ENST00000523334 CDC27P30260 824 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 BAG6P46379 1132 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 NAPAP54920 295 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 CTR9Q6PD62 1173 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 OGFOD1Q8N543 542 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 ENAHQ8N8S7 591 aaPredicted RBP4.46□□□□□ -1.7
HDAC2-215ENST00000523334 TDRD7Q8NHU6 1098 aaKnown RBP4.46□□□□□ -1.7
HDAC2-215ENST00000523334 MASTLQ96GX5 879 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 CDK5RAP3Q96JB5 506 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 USP40Q9NVE5 1235 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 CLIC4Q9Y696 253 aa4.46□□□□□ -1.7
HDAC2-215ENST00000523334 STK36Q9NRP7 1315 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CYP2D6P10635 497 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 FDPSP14324 419 aaKnown RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CMA1P23946 247 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 UBA7P41226 1012 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 DHX8Q14562 1220 aaKnown RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 TXNRD3Q86VQ6 643 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SP8Q8IXZ3 490 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SMARCE1Q969G3 411 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 RRP36Q96EU6 259 aaKnown RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 PGBD1Q96JS3 809 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 LZTS2Q9BRK4 669 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 PYM1Q9BRP8 204 aaKnown RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 RIOK1Q9BRS2 568 aaKnown RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 LRRC4BQ9NT99 713 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 KCNH3Q9ULD8 1083 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 HPS5Q9UPZ3 1129 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 ZKSCAN5Q9Y2L8 839 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CBFA2T2O43439 604 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 ORC4O43929 436 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 GNA11P29992 359 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CLCN1P35523 988 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SUPT20HQ8NEM7 779 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 TBC1D16Q8TBP0 767 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SH3RF3Q8TEJ3 882 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 FOXP1Q9H334 677 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CBX8Q9HC52 389 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 C6orf50Q9HD87 102 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CLIP2Q9UDT6 1046 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 LRP6O75581 1613 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 WTIPA6NIX2 430 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 MMP1P03956 469 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SCG2P13521 617 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 PFKFB1P16118 471 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SCNN1DP51172 638 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 ZNF174Q15697 407 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CFAP100Q494V2 611 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 FILIP1LQ4L180 1135 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 TTC38Q5R3I4 469 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 N4BP2Q86UW6 1770 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 KIAA0825Q8IV33 1275 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 LTBP4Q8N2S1 1624 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 AOPEPQ8N6M6 819 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 DYNLL2Q96FJ2 89 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 SENP2Q9HC62 589 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 TCP11L1Q9NUJ3 509 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 HDAC9Q9UKV0 1011 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 CTDP1Q9Y5B0 961 aaPredicted RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 MROH7-TTC4A0A0A0MT08 1334 aa4.45□□□□□ -1.7
HDAC2-215ENST00000523334 PDS5AQ29RF7 1337 aaKnown RBP4.45□□□□□ -1.7
HDAC2-215ENST00000523334 PRPF3O43395 683 aaKnown RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 TPM2P07951 284 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 STIM1Q13586 685 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 SBK1Q52WX2 424 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 PIK3AP1Q6ZUJ8 805 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 ANAPC4Q9UJX5 808 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 R3HCC1Q9Y3T6 440 aaKnown RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 ATP6V0A2Q9Y487 856 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 PPIP5K2O43314 1243 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 MCM7P33993 719 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 NDUFA8P51970 172 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 KLHL10Q6JEL2 608 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 DHX58Q96C10 678 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 RAB34Q9BZG1 259 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 KIAA1468Q9P260 1216 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 KLRF2D3W0D1 207 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 PPP6R2O75170 966 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 TOP1P11387 765 aaKnown RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 EIF6P56537 245 aaKnown RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 NR5A1Q13285 461 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 TSR1Q2NL82 804 aaKnown RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 C12orf60Q5U649 245 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 CC2D2BQ6DHV5 1058 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 TMTC3Q6ZXV5 915 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 ADGRA1Q86SQ6 560 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 ERCC4Q92889 916 aaPredicted RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 FERMT2Q96AC1 680 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 TTC12Q9H892 705 aaPredicted RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 DBNDD1Q9H9R9 158 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 DOT1LQ8TEK3 1739 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 COL16A1Q07092 1604 aaPredicted RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 VWA3AA6NCI4 1184 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 POLR2DO15514 142 aaKnown RBP4.44□□□□□ -1.7
HDAC2-215ENST00000523334 PLEKHA8P1O95397 391 aa4.44□□□□□ -1.7
HDAC2-215ENST00000523334 AFMP43652 599 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms