RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PPARAQ07869 468 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 SREBF2Q12772 1141 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 IMMTQ16891 758 aaKnown RBP14.17□□□□□ -0.14
PVT1-215ENST00000522963 ERO1BQ86YB8 467 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 NBPF3Q9H094 633 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 PICK1Q9NRD5 415 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 RNF186Q9NXI6 227 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 ZNF112Q9UJU3 913 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 TAF6LQ9Y6J9 622 aa14.17□□□□□ -0.14
PVT1-215ENST00000522963 COL2A1P02458 1487 aaPredicted RBP14.17□□□□□ -0.14
PVT1-215ENST00000522963 BAZ2AQ9UIF9 1905 aaKnown RBP14.17□□□□□ -0.14
PVT1-215ENST00000522963 SPDYE5A6NIY4 337 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 PHF20L1A8MW92 1017 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 ZNF213O14771 459 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 CTDSPL2Q05D32 466 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 TTC6Q86TZ1 520 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 TBC1D10CQ8IV04 446 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 AMOTL1Q8IY63 956 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
PVT1-215ENST00000522963 RASEFQ8IZ41 740 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 KCNB2Q92953 911 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 DYNLL2Q96FJ2 89 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.16□□□□□ -0.14
PVT1-215ENST00000522963 ANAPC4Q9UJX5 808 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 TACC3Q9Y6A5 838 aa14.16□□□□□ -0.14
PVT1-215ENST00000522963 SIPA1L1O43166 1804 aa14.15□□□□□ -0.14
PVT1-215ENST00000522963 TBC1D12O60347 775 aa14.15□□□□□ -0.14
PVT1-215ENST00000522963 HSPA8P11142 646 aaKnown RBP14.15□□□□□ -0.14
PVT1-215ENST00000522963 CCDC84Q86UT8 332 aaPredicted RBP14.15□□□□□ -0.14
PVT1-215ENST00000522963 FOXP4Q8IVH2 680 aaPredicted RBP14.15□□□□□ -0.14
PVT1-215ENST00000522963 SCYL3Q8IZE3 742 aa14.15□□□□□ -0.14
PVT1-215ENST00000522963 STK11IPQ8N1F8 1099 aa14.15□□□□□ -0.14
PVT1-215ENST00000522963 C22orf23Q9BZE7 217 aa14.15□□□□□ -0.14
PVT1-215ENST00000522963 INCENPQ9NQS7 918 aa14.15□□□□□ -0.14
PVT1-215ENST00000522963 HERC5Q9UII4 1024 aaKnown RBP14.15□□□□□ -0.14
PVT1-215ENST00000522963 DDX60LQ5H9U9 1706 aaKnown RBP14.15□□□□□ -0.14
PVT1-215ENST00000522963 CASP8AP2Q9UKL3 1982 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 DOCK1Q14185 1865 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 CCL15-CCL14A0A0B4J2E2 113 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 IRF6O14896 467 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 CA12O43570 354 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 CTNND1O60716 968 aaKnown RBP14.14□□□□□ -0.15
PVT1-215ENST00000522963 GDF11O95390 407 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 TBC1D8O95759 1140 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 MCCP23508 829 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 TM4SF4P48230 202 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 GTF2A2P52657 109 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 MAP3K10Q02779 954 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 PPATQ06203 517 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 GABPAQ06546 454 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 PPIL2Q13356 520 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 CCL15Q16663 113 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 NOL9Q5SY16 702 aaKnown RBP14.14□□□□□ -0.15
PVT1-215ENST00000522963 RNF20Q5VTR2 975 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 METTL16Q86W50 562 aaKnown RBP14.14□□□□□ -0.15
PVT1-215ENST00000522963 SLC44A5Q8NCS7 719 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 EHD4Q9H223 541 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 DNAJC18Q9H819 358 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 UPF2Q9HAU5 1272 aaKnown RBP14.14□□□□□ -0.15
PVT1-215ENST00000522963 SNX14Q9Y5W7 946 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 ZHX2Q9Y6X8 837 aa14.14□□□□□ -0.15
PVT1-215ENST00000522963 PTPRAP18433 802 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 INHBEP58166 350 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 SNAPC2Q13487 334 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
PVT1-215ENST00000522963 AKNAD1Q5T1N1 836 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 OTUD7BQ6GQQ9 843 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 C16orf86Q6ZW13 317 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 STAG1Q8WVM7 1258 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 TBC1D32Q96NH3 1257 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 SERPINB13Q9UIV8 391 aa14.13□□□□□ -0.15
PVT1-215ENST00000522963 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.13□□□□□ -0.15
PVT1-215ENST00000522963 E7EWF7 191 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 IGF2BP3O00425 579 aaKnown RBP eCLIP14.12□□□□□ -0.15
PVT1-215ENST00000522963 SLC3A2P08195 630 aaKnown RBP14.12□□□□□ -0.15
PVT1-215ENST00000522963 FGRP09769 529 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 CETPP11597 493 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 ZKSCAN1P17029 563 aaPredicted RBP14.12□□□□□ -0.15
PVT1-215ENST00000522963 CAP2P40123 477 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 CDK8P49336 464 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 RBM25P49756 843 aaKnown RBP14.12□□□□□ -0.15
PVT1-215ENST00000522963 ADCK5Q3MIX3 580 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 TSGA10IPQ3SY00 556 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 BRI3BPQ8WY22 251 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 MS4A4AQ96JQ5 239 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 NEDD4P46934 1319 aa14.12□□□□□ -0.15
PVT1-215ENST00000522963 TRIM75PA6NK02 468 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 PRDM1O75626 825 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 SHMT1P34896 483 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 PDE4BQ07343 736 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 COL9A3Q14050 684 aaPredicted RBP14.11□□□□□ -0.15
PVT1-215ENST00000522963 SHROOM1Q2M3G4 852 aaPredicted RBP14.11□□□□□ -0.15
PVT1-215ENST00000522963 COL13A1Q5TAT6 717 aaPredicted RBP14.11□□□□□ -0.15
PVT1-215ENST00000522963 MFSD6Q6ZSS7 791 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
PVT1-215ENST00000522963 IL17RAQ96F46 866 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms