RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 OTUD7AQ8TE49 926 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-210ENST00000521932 GPATCH3Q96I76 525 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 GJA3Q9Y6H8 435 aa10.17□□□□□ -0.78
VPS13B-210ENST00000521932 COL1A1P02452 1464 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-210ENST00000521932 CYP2E1P05181 493 aaPredicted RBP10.16□□□□□ -0.78
VPS13B-210ENST00000521932 GMPSP49915 693 aaPredicted RBP10.16□□□□□ -0.78
VPS13B-210ENST00000521932 PDE1AP54750 535 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 PI16Q6UXB8 463 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 PLEKHM2Q8IWE5 1019 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 ZGPATQ8N5A5 531 aaKnown RBP10.16□□□□□ -0.78
VPS13B-210ENST00000521932 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 HPS1Q92902 700 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 HAUS7Q99871 368 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 MXD3Q9BW11 206 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 MRIQ9BWK5 157 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 PSME4Q14997 1843 aa10.16□□□□□ -0.78
VPS13B-210ENST00000521932 AOX1Q06278 1338 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 ZNF646O15015 1829 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-210ENST00000521932 ERC2O15083 957 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 GLRX3O76003 335 aaKnown RBP10.15□□□□□ -0.78
VPS13B-210ENST00000521932 USP17L8P0C7I0 530 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 CTHP32929 405 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 ZAP70P43403 619 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 ZNF280AP59817 542 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-210ENST00000521932 CHAF1AQ13111 956 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-210ENST00000521932 ZNF511Q8NB15 262 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 PROCA1Q8NCQ7 364 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-210ENST00000521932 BOLA2Q9H3K6 86 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 GPRC5DQ9NZD1 345 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 CNOT7Q9UIV1 285 aaKnown RBP10.15□□□□□ -0.78
VPS13B-210ENST00000521932 JAG2Q9Y219 1238 aa10.15□□□□□ -0.78
VPS13B-210ENST00000521932 AKAP11Q9UKA4 1901 aa10.15□□□□□ -0.79
VPS13B-210ENST00000521932 IQCA1LA6NCM1 817 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 YY1P25490 414 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 EPS15P42566 896 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 HDLBPQ00341 1268 aaKnown RBP10.14□□□□□ -0.79
VPS13B-210ENST00000521932 TTF1Q15361 905 aaPredicted RBP10.14□□□□□ -0.79
VPS13B-210ENST00000521932 GRIK5Q16478 980 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 SPTY2D1Q68D10 685 aaPredicted RBP10.14□□□□□ -0.79
VPS13B-210ENST00000521932 OGFOD1Q8N543 542 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 EHBP1Q8NDI1 1231 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 TSC1Q92574 1164 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 ANTXR1Q9H6X2 564 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 SNRKQ9NRH2 765 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
VPS13B-210ENST00000521932 WDR90Q96KV7 1748 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 H7C1D1 291 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 ALDH1A1P00352 501 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 LDHBP07195 334 aaKnown RBP10.13□□□□□ -0.79
VPS13B-210ENST00000521932 VEGFAP15692 232 aaPredicted RBP10.13□□□□□ -0.79
VPS13B-210ENST00000521932 PRDX5P30044 214 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
VPS13B-210ENST00000521932 SH3D19Q5HYK7 790 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 TSHZ3Q63HK5 1081 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 TMED8Q6PL24 325 aaPredicted RBP10.13□□□□□ -0.79
VPS13B-210ENST00000521932 TBC1D9Q6ZT07 1266 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 KIAA0825Q8IV33 1275 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 MTMR14Q8NCE2 650 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 RRAGCQ9HB90 399 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 ADARB2Q9NS39 739 aaKnown RBP10.13□□□□□ -0.79
VPS13B-210ENST00000521932 PAG1Q9NWQ8 432 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 ABCF2Q9UG63 623 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 HACL1Q9UJ83 578 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 HDAC9Q9UKV0 1011 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 TTF2Q9UNY4 1162 aaKnown RBP10.13□□□□□ -0.79
VPS13B-210ENST00000521932 NDUFB9Q9Y6M9 179 aa10.13□□□□□ -0.79
VPS13B-210ENST00000521932 MAST3O60307 1309 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 GOLIM4O00461 696 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 AXIN1O15169 862 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 LMOD1P29536 600 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 SKIV2LQ15477 1246 aaKnown RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 HHIPL2Q6UWX4 724 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 USP50Q70EL3 339 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 TICAM2Q86XR7 235 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 NSUN4Q96CB9 384 aaKnown RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 ZBED3Q96IU2 234 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 TAF1DQ9H5J8 278 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 MYOZ2Q9NPC6 264 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 PIH1D3Q9NQM4 214 aaKnown RBP10.12□□□□□ -0.79
VPS13B-210ENST00000521932 LRP2BPQ9P2M1 347 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 TLL2Q9Y6L7 1015 aa10.12□□□□□ -0.79
VPS13B-210ENST00000521932 SHTN1A0MZ66 631 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 F8W031 263 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-210ENST00000521932 EPHX2P34913 555 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 HIRAP54198 1017 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-210ENST00000521932 MECOMQ03112 1051 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 MAP3K12Q12852 859 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 CTC1Q2NKJ3 1217 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 PNMA8AQ86V59 439 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-210ENST00000521932 ZNF784Q8NCA9 323 aaPredicted RBP10.11□□□□□ -0.79
VPS13B-210ENST00000521932 ZNF384Q8TF68 577 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 FOXJ1Q92949 421 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 EDC3Q96F86 508 aaKnown RBP10.11□□□□□ -0.79
VPS13B-210ENST00000521932 ZDHHC15Q96MV8 337 aa10.11□□□□□ -0.79
VPS13B-210ENST00000521932 NMRK2Q9NPI5 230 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms