RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 USP44Q9H0E7 712 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
MRPS28-207ENST00000521434 CEP126Q9P2H0 1117 aa11.05□□□□□ -0.64
MRPS28-207ENST00000521434 RLFQ13129 1914 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 CIAO1O76071 339 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 CCND3P30281 292 aaPredicted RBP11.04□□□□□ -0.64
MRPS28-207ENST00000521434 MAPK4P31152 587 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 RGS2P41220 211 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
MRPS28-207ENST00000521434 USP6NLQ92738 828 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 AS3MTQ9HBK9 375 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 ABCF2Q9UG63 623 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 MROH7-TTC4A0A0A0MT08 1334 aa11.04□□□□□ -0.64
MRPS28-207ENST00000521434 PDS5AQ29RF7 1337 aaKnown RBP11.04□□□□□ -0.64
MRPS28-207ENST00000521434 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 GPR75-ASB3A0A0A6YYF3 556 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 HOXA7P31268 230 aaPredicted RBP11.03□□□□□ -0.64
MRPS28-207ENST00000521434 RHBDL3P58872 404 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 HERVK_113P62684 666 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 CCDC102BQ68D86 513 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 CCAR1Q8IX12 1150 aaKnown RBP11.03□□□□□ -0.64
MRPS28-207ENST00000521434 SYMPKQ92797 1274 aaKnown RBP11.03□□□□□ -0.64
MRPS28-207ENST00000521434 P2RX7Q99572 595 aaKnown RBP11.03□□□□□ -0.64
MRPS28-207ENST00000521434 WDR18Q9BV38 432 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 SENP6Q9GZR1 1112 aaPredicted RBP11.03□□□□□ -0.64
MRPS28-207ENST00000521434 SIL1Q9H173 461 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 SEMA6BQ9H3T3 888 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 TXNRD2Q9NNW7 524 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 TMOD4Q9NZQ9 345 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 PRKAG2Q9UGJ0 569 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 BDP1A6H8Y1 2624 aa11.03□□□□□ -0.64
MRPS28-207ENST00000521434 PEX10O60683 326 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 MAP4K4O95819 1239 aaPredicted RBP11.02□□□□□ -0.65
MRPS28-207ENST00000521434 BACE1P56817 501 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 ERVK-9P63128 1117 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 ERVK-24P63145 666 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 MTMR2Q13614 643 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 RASGRF1Q13972 1273 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
MRPS28-207ENST00000521434 CCL14Q16627 93 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 MORN1Q5T089 497 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 APBA2Q99767 749 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 RBPJLQ9UBG7 517 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 HERC5Q9UII4 1024 aaKnown RBP11.02□□□□□ -0.65
MRPS28-207ENST00000521434 PTPRCP08575 1304 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 SIPA1L1O43166 1804 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 CDK5RAP2Q96SN8 1893 aa11.02□□□□□ -0.65
MRPS28-207ENST00000521434 MSCO60682 206 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 ADORA1P30542 326 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 IL15P40933 162 aaPredicted RBP11.01□□□□□ -0.65
MRPS28-207ENST00000521434 MECOMQ03112 1051 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 GPR142Q7Z601 462 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 PLEKHH3Q7Z736 793 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
MRPS28-207ENST00000521434 GTF3C2Q8WUA4 911 aaPredicted RBP11.01□□□□□ -0.65
MRPS28-207ENST00000521434 MYLIPQ8WY64 445 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 PORCNQ9H237 461 aa11.01□□□□□ -0.65
MRPS28-207ENST00000521434 C19orf81C9J6K1 198 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 LDHCP07864 332 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 ASNSP08243 561 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
MRPS28-207ENST00000521434 GSTO1P78417 241 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 SMAD3P84022 425 aaKnown RBP11□□□□□ -0.65
MRPS28-207ENST00000521434 MAP2K5Q13163 448 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 SHHQ15465 462 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 Q3C1V9 767 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 MFSD14CQ5VZR4 134 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
MRPS28-207ENST00000521434 ZNF384Q8TF68 577 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 LPAR1Q92633 364 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 DDX20Q9UHI6 824 aaKnown RBP11□□□□□ -0.65
MRPS28-207ENST00000521434 FOCADQ5VW36 1801 aa11□□□□□ -0.65
MRPS28-207ENST00000521434 USP17L10C9JJH3 530 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 DNM1LO00429 736 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 GLRX3O76003 335 aaKnown RBP10.99□□□□□ -0.65
MRPS28-207ENST00000521434 FOSL2P15408 326 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 COL9A1P20849 921 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 RTP1P59025 263 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 C9orf50Q5SZB4 431 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 EDC3Q96F86 508 aaKnown RBP10.99□□□□□ -0.65
MRPS28-207ENST00000521434 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 TTYH1Q9H313 450 aaPredicted RBP10.99□□□□□ -0.65
MRPS28-207ENST00000521434 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
MRPS28-207ENST00000521434 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
MRPS28-207ENST00000521434 PYGBP11216 843 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 CNGA1P29973 690 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 TIMM10P62072 90 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 TEX11Q8IYF3 940 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 NSUN4Q96CB9 384 aaKnown RBP10.98□□□□□ -0.65
MRPS28-207ENST00000521434 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 DHX36Q9H2U1 1008 aaKnown RBP10.98□□□□□ -0.65
MRPS28-207ENST00000521434 GINM1Q9NU53 330 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 FLRT1Q9NZU1 646 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 CHD9Q3L8U1 2897 aa10.98□□□□□ -0.65
MRPS28-207ENST00000521434 TMEM265A0A087WTH1 108 aa10.97□□□□□ -0.65
MRPS28-207ENST00000521434 UBTFL1P0CB47 393 aaPredicted RBP10.97□□□□□ -0.65
MRPS28-207ENST00000521434 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
MRPS28-207ENST00000521434 CCNA1P78396 465 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms