RNA–Protein interactions for RNA: ENST00000520467.5

SCUBE2-207, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCUBE2, Length 3,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-207ENST00000520467 ZNF142P52746 1687 aaPredicted RBP18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 NR5A1Q13285 461 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 TMEM67Q5HYA8 995 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 RRP12Q5JTH9 1297 aaKnown RBP18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 NOSTRINQ8IVI9 506 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 PANX2Q96RD6 677 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 RAB21Q9UL25 225 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 PCDHB6Q9Y5E3 794 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 RNF40O75150 1001 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 A1BGP04217 495 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 MAGEA9P43362 315 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 MORC3Q14149 939 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 FBXL16Q8N461 479 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 MSANTD4Q8NCY6 345 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 GUCA1BQ9UMX6 200 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 A0A1B0GTH6 734 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 PLCD1P51178 756 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 SSRP1Q08945 709 aaKnown RBP18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 IQUBQ8NA54 791 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 TRIM10Q9UDY6 481 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 JRKLQ9Y4A0 524 aa18.63■□□□□ 0.57
SCUBE2-207ENST00000520467 SYNRGQ9UMZ2 1314 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 USP5P45974 858 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 FAM71BQ8TC56 605 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 CAPZA3Q96KX2 299 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 NUP88Q99567 741 aaPredicted RBP18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 ZKSCAN3Q9BRR0 538 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 AFDNP55196 1824 aaKnown RBP18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 PES1O00541 588 aaKnown RBP18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 MFAP3LO75121 409 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 TOB1P50616 345 aaPredicted RBP18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 FILIP1LQ4L180 1135 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 NBPF3Q9H094 633 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 ACBD3Q9H3P7 528 aa18.62■□□□□ 0.57
SCUBE2-207ENST00000520467 SH2B2O14492 632 aaPredicted RBP18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 SART3Q15020 963 aaKnown RBP18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 GSPT2Q8IYD1 628 aaKnown RBP18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 GBP3Q9H0R5 595 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 VPS16Q9H269 839 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 CD44P16070 742 aaKnown RBP18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 E2F4Q16254 413 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 CCDC57Q2TAC2 916 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 CSRNP2Q9H175 543 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 HDAC6Q9UBN7 1215 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 TFR2Q9UP52 801 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
SCUBE2-207ENST00000520467 FBXO2Q9UK22 296 aaPredicted RBP18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 CPDO75976 1380 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 FAM237AA0A1B0GTK4 181 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 ZFYP08048 801 aaPredicted RBP18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 N4BP3O15049 544 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 GYPCP04921 128 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 PIP4K2BP78356 416 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 MICALL1Q8N3F8 863 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 AFAP1L1Q8TED9 768 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 MYO6Q9UM54 1294 aa18.6■□□□□ 0.57
SCUBE2-207ENST00000520467 SRGAP2O75044 1071 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 RASGRP2Q7LDG7 609 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 CCDC148Q8NFR7 591 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 EPSTI1Q96J88 318 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 CABP5Q9NP86 173 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 KIF1AQ12756 1690 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 SMARCC1Q92922 1105 aaPredicted RBP18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 CTNND2Q9UQB3 1225 aa18.59■□□□□ 0.57
SCUBE2-207ENST00000520467 PTPREP23469 700 aa18.58■□□□□ 0.57
SCUBE2-207ENST00000520467 ERVK-24P63145 666 aa18.58■□□□□ 0.57
SCUBE2-207ENST00000520467 CTR9Q6PD62 1173 aa18.58■□□□□ 0.57
SCUBE2-207ENST00000520467 GPATCH11Q8N954 259 aa18.58■□□□□ 0.57
SCUBE2-207ENST00000520467 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.57
SCUBE2-207ENST00000520467 CTDSPL2Q05D32 466 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 SPATA1Q5VX52 437 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 OXER1Q8TDS5 423 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 NAA15Q9BXJ9 866 aaKnown RBP18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 ADD3Q9UEY8 706 aaKnown RBP18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 TTF2Q9UNY4 1162 aaKnown RBP18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 MST1RQ04912 1400 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 SARSP49591 514 aaKnown RBP18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 NTRK3Q16288 839 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 CNGA4Q8IV77 575 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 TAB2Q9NYJ8 693 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 MAPK8IP1Q9UQF2 711 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 ALS2Q96Q42 1657 aa18.58■□□□□ 0.56
SCUBE2-207ENST00000520467 RNF225M0QZC1 329 aaPredicted RBP18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 ACTN4O43707 911 aaKnown RBP18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 WHAMMP3Q1A5X7 153 aa18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 FAM217BQ9NTX9 383 aaPredicted RBP18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 ARFGEF2Q9Y6D5 1785 aa18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 FAM205CA6NFA0 338 aa18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 APTXQ7Z2E3 356 aaKnown RBP18.57■□□□□ 0.56
SCUBE2-207ENST00000520467 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
SCUBE2-207ENST00000520467 CORO7P57737 925 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms