RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 GIMAP6Q6P9H5 292 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
HPS4-218ENST00000519774 STK11IPQ8N1F8 1099 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
HPS4-218ENST00000519774 FOXP2O15409 715 aa14.15□□□□□ -0.14
HPS4-218ENST00000519774 SHMT1P34896 483 aa14.15□□□□□ -0.14
HPS4-218ENST00000519774 MFAP1P55081 439 aaKnown RBP14.15□□□□□ -0.14
HPS4-218ENST00000519774 MAP2K1Q02750 393 aaPredicted RBP14.15□□□□□ -0.14
HPS4-218ENST00000519774 GABPAQ06546 454 aa14.15□□□□□ -0.14
HPS4-218ENST00000519774 PPIL2Q13356 520 aa14.15□□□□□ -0.14
HPS4-218ENST00000519774 PHIPQ8WWQ0 1821 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 MANSC4A6NHS7 340 aaPredicted RBP14.14□□□□□ -0.15
HPS4-218ENST00000519774 IRF6O14896 467 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 PTPRAP18433 802 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 CHMLP26374 656 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 PPATQ06203 517 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 SREBF2Q12772 1141 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 CERKLQ49MI3 558 aaPredicted RBP14.14□□□□□ -0.15
HPS4-218ENST00000519774 SBK1Q52WX2 424 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 BEGAINQ9BUH8 593 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 SWAP70Q9UH65 585 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 ZHX2Q9Y6X8 837 aa14.14□□□□□ -0.15
HPS4-218ENST00000519774 ROBO3Q96MS0 1386 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 CCL15-CCL14A0A0B4J2E2 113 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
HPS4-218ENST00000519774 GH2P01242 217 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 HSPA1AP0DMV8 641 aaKnown RBP14.13□□□□□ -0.15
HPS4-218ENST00000519774 HSPA1BP0DMV9 641 aaKnown RBP14.13□□□□□ -0.15
HPS4-218ENST00000519774 HSPD1P10809 573 aaKnown RBP14.13□□□□□ -0.15
HPS4-218ENST00000519774 CDK8P49336 464 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 JAG1P78504 1218 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 CCL15Q16663 113 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 ABCB5Q2M3G0 1257 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 TATDN1Q6P1N9 297 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 C16orf86Q6ZW13 317 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 RUFY2Q8WXA3 655 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 IL25Q9H293 177 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 RAD50Q92878 1312 aa14.13□□□□□ -0.15
HPS4-218ENST00000519774 USP17L5A8MUK1 530 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 ASNSP08243 561 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 GTF2A2P52657 109 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 PPARAQ07869 468 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 CABP5Q9NP86 173 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 WBP1LQ9NX94 342 aa14.12□□□□□ -0.15
HPS4-218ENST00000519774 PTPRFP10586 1907 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 TRIM75PA6NK02 468 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 CETPP11597 493 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 RAB3GAP1Q15042 981 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 REM2Q8IYK8 340 aaPredicted RBP14.11□□□□□ -0.15
HPS4-218ENST00000519774 BRI3BPQ8WY22 251 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 AS3MTQ9HBK9 375 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
HPS4-218ENST00000519774 IGF2BP3O00425 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
HPS4-218ENST00000519774 PRDM1O75626 825 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 FGAP02671 866 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 SLC3A2P08195 630 aaKnown RBP14.1□□□□□ -0.15
HPS4-218ENST00000519774 AKR1B1P15121 316 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 TM4SF4P48230 202 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 SPP2Q13103 211 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 ALX1Q15699 326 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 MS4A4AQ96JQ5 239 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 GINM1Q9NU53 330 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 TSKSQ9UJT2 592 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 AFG3L2Q9Y4W6 797 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 LAMA4Q16363 1823 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 ZMYM6O95789 1325 aa14.1□□□□□ -0.15
HPS4-218ENST00000519774 CXCL11O14625 94 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 FOXN1O15353 648 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 SGSM2O43147 1006 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 CDC45O75419 566 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 TRPA1O75762 1119 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 INHBEP58166 350 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 HAND2P61296 217 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 PDE4BQ07343 736 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 SEPT2Q15019 361 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 GADL1Q6ZQY3 521 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 CLEC10AQ8IUN9 316 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 ZNF280CQ8ND82 737 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 FEZ1Q99689 392 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 DSCC1Q9BVC3 393 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 RNF186Q9NXI6 227 aa14.09□□□□□ -0.15
HPS4-218ENST00000519774 A0A0G2JLL6 359 aaPredicted RBP14.08□□□□□ -0.16
HPS4-218ENST00000519774 TESPA1A2RU30 521 aaPredicted RBP14.08□□□□□ -0.16
HPS4-218ENST00000519774 RASA1P20936 1047 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 GUCY1A2P33402 732 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 MTMR2Q13614 643 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 CASC1Q6TDU7 716 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 TMEM179Q6ZVK1 233 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 PRRT2Q7Z6L0 340 aaPredicted RBP14.08□□□□□ -0.16
HPS4-218ENST00000519774 CCDC17Q96LX7 622 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 PTPN18Q99952 460 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 TBC1D2Q9BYX2 928 aa14.08□□□□□ -0.16
HPS4-218ENST00000519774 ZNF287Q9HBT7 754 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms