RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 WDR18Q9BV38 432 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 PORCNQ9H237 461 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 PI4KBQ9UBF8 816 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 HERC5Q9UII4 1024 aaKnown RBP10.75□□□□□ -0.69
TRIM35-202ENST00000519219 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 FPGT-TNNI3KV9GXZ4 949 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 PFASO15067 1338 aa10.75□□□□□ -0.69
TRIM35-202ENST00000519219 UQCRFS1P1P0C7P4 283 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 BACE1P56817 501 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 HERVK_113P62684 666 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 IRX3P78415 501 aaPredicted RBP10.74□□□□□ -0.69
TRIM35-202ENST00000519219 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 MAP3K21Q5TCX8 1036 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 NECAB2Q7Z6G3 386 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 GDF15Q99988 308 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 RBPJLQ9UBG7 517 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 ZBTB21Q9ULJ3 1066 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 RPTORQ8N122 1335 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 NAV1Q8NEY1 1877 aa10.74□□□□□ -0.69
TRIM35-202ENST00000519219 MAP4K4O95819 1239 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 PRKAR2AP13861 404 aaKnown RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 CCND3P30281 292 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 HOXA7P31268 230 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 PPP4CP60510 307 aa10.73□□□□□ -0.69
TRIM35-202ENST00000519219 EVX2Q03828 476 aa10.73□□□□□ -0.69
TRIM35-202ENST00000519219 PABPC4Q13310 644 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 METTL16Q86W50 562 aaKnown RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 PAGR1Q9BTK6 254 aa10.73□□□□□ -0.69
TRIM35-202ENST00000519219 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
TRIM35-202ENST00000519219 AS3MTQ9HBK9 375 aa10.73□□□□□ -0.69
TRIM35-202ENST00000519219 HMX1Q9NP08 348 aaPredicted RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 EMILIN3Q9NT22 766 aa10.73□□□□□ -0.69
TRIM35-202ENST00000519219 DBNLQ9UJU6 430 aaKnown RBP10.73□□□□□ -0.69
TRIM35-202ENST00000519219 RLFQ13129 1914 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 DNAH12Q6ZR08 3092 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 CNMDO75829 334 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 GH2P01242 217 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 ASNSP08243 561 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 RLBP1P12271 317 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 MAGEA10P43363 369 aaPredicted RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 CACNB2Q08289 660 aaPredicted RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 ZYXQ15942 572 aaKnown RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 Q7L0L9 218 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 CRACR2BQ8N4Y2 399 aaPredicted RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 GPRC5AQ8NFJ5 357 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 USP6NLQ92738 828 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 NOL10Q9BSC4 688 aaKnown RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 CCDC8Q9H0W5 538 aaPredicted RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 DHX36Q9H2U1 1008 aaKnown RBP10.72□□□□□ -0.69
TRIM35-202ENST00000519219 C11orf49Q9H6J7 331 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 GPR108Q9NPR9 543 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 TMOD4Q9NZQ9 345 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 OGDHLQ9ULD0 1010 aa10.72□□□□□ -0.69
TRIM35-202ENST00000519219 A0A1W2PPC1 479 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 IPO8O15397 1037 aaKnown RBP10.71□□□□□ -0.69
TRIM35-202ENST00000519219 SURF6O75683 361 aaKnown RBP10.71□□□□□ -0.69
TRIM35-202ENST00000519219 BAG3O95817 575 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 MYH8P13535 1937 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 CYP7A1P22680 504 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 ERVK-9P63128 1117 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 ERVK-24P63145 666 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 ATP8B2P98198 1209 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 OS9Q13438 667 aaPredicted RBP10.71□□□□□ -0.69
TRIM35-202ENST00000519219 MORN1Q5T089 497 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 GPR142Q7Z601 462 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 ANKLE1Q8NAG6 615 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 EAF2Q96CJ1 260 aaPredicted RBP10.71□□□□□ -0.69
TRIM35-202ENST00000519219 NUDT12Q9BQG2 462 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 NBPF3Q9H094 633 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 ANTXR1Q9H6X2 564 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 FLRT1Q9NZU1 646 aa10.71□□□□□ -0.69
TRIM35-202ENST00000519219 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
TRIM35-202ENST00000519219 PARP14Q460N5 1801 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 C19orf81C9J6K1 198 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 COL6A1P12109 1028 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 PLCG2P16885 1265 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 LRRC26Q2I0M4 334 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 CCDC158Q5M9N0 1113 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 LHX8Q68G74 356 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 FOXP4Q8IVH2 680 aaPredicted RBP10.7□□□□□ -0.7
TRIM35-202ENST00000519219 ACER1Q8TDN7 264 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
TRIM35-202ENST00000519219 LTBP2Q14767 1821 aa10.7□□□□□ -0.7
TRIM35-202ENST00000519219 IDH1O75874 414 aaKnown RBP10.69□□□□□ -0.7
TRIM35-202ENST00000519219 XRCC5P13010 732 aaKnown RBP10.69□□□□□ -0.7
TRIM35-202ENST00000519219 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
TRIM35-202ENST00000519219 MAPK4P31152 587 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 GUCY1A2P33402 732 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 BMP8BP34820 402 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 USP17L2Q6R6M4 530 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 PLEKHH3Q7Z736 793 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 MAGEB6Q8N7X4 407 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 SLC17A8Q8NDX2 589 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 SOCS4Q8WXH5 440 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 ZNF512BQ96KM6 892 aaPredicted RBP10.69□□□□□ -0.7
TRIM35-202ENST00000519219 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
TRIM35-202ENST00000519219 BTBD7Q9P203 1132 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms