RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 NBPF11Q86T75 865 aa19.27■□□□□ 0.68
PCM1-206ENST00000518537 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.68
PCM1-206ENST00000518537 RTEL1Q9NZ71 1219 aa19.27■□□□□ 0.68
PCM1-206ENST00000518537 DAGLAQ9Y4D2 1042 aa19.27■□□□□ 0.68
PCM1-206ENST00000518537 F8W031 263 aaPredicted RBP19.26■□□□□ 0.67
PCM1-206ENST00000518537 NMT2O60551 498 aa19.26■□□□□ 0.67
PCM1-206ENST00000518537 RHBDL3P58872 404 aa19.26■□□□□ 0.67
PCM1-206ENST00000518537 TFAP4Q01664 338 aa19.26■□□□□ 0.67
PCM1-206ENST00000518537 MYSM1Q5VVJ2 828 aa19.26■□□□□ 0.67
PCM1-206ENST00000518537 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
PCM1-206ENST00000518537 SLX4Q8IY92 1834 aa19.26■□□□□ 0.67
PCM1-206ENST00000518537 AKAP17AQ02040 695 aaKnown RBP19.26■□□□□ 0.67
PCM1-206ENST00000518537 FLT1P17948 1338 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 UBE2Q2LH0YL09 131 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 PLCD1P51178 756 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 ZNF444Q8N0Y2 327 aaPredicted RBP19.25■□□□□ 0.67
PCM1-206ENST00000518537 CERS5Q8N5B7 392 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 ANP32BQ92688 251 aaKnown RBP19.25■□□□□ 0.67
PCM1-206ENST00000518537 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 TTF2Q9UNY4 1162 aaKnown RBP19.25■□□□□ 0.67
PCM1-206ENST00000518537 GUCY1A2P33402 732 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 TROAPQ12815 778 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 STK38Q15208 465 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 CCDC178Q5BJE1 867 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 RNF26Q9BY78 433 aaPredicted RBP19.25■□□□□ 0.67
PCM1-206ENST00000518537 DDX19AQ9NUU7 478 aaKnown RBP19.25■□□□□ 0.67
PCM1-206ENST00000518537 DACT1Q9NYF0 836 aa19.25■□□□□ 0.67
PCM1-206ENST00000518537 PODNQ7Z5L7 613 aa19.24■□□□□ 0.67
PCM1-206ENST00000518537 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
PCM1-206ENST00000518537 MXD3Q9BW11 206 aa19.24■□□□□ 0.67
PCM1-206ENST00000518537 DBNDD1Q9H9R9 158 aa19.24■□□□□ 0.67
PCM1-206ENST00000518537 MYH1P12882 1939 aa19.24■□□□□ 0.67
PCM1-206ENST00000518537 MYH6P13533 1939 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 ME1P48163 572 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 SAFBQ15424 915 aaKnown RBP eCLIP19.23■□□□□ 0.67
PCM1-206ENST00000518537 DDX60LQ5H9U9 1706 aaKnown RBP19.23■□□□□ 0.67
PCM1-206ENST00000518537 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
PCM1-206ENST00000518537 POLR3EQ9NVU0 708 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 CLIC4Q9Y696 253 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 YEATS4O95619 227 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 TSPY3P0CV98 308 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 TSPY8P0CW00 308 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 SF3A1Q15459 793 aaKnown RBP19.23■□□□□ 0.67
PCM1-206ENST00000518537 CCAR1Q8IX12 1150 aaKnown RBP19.23■□□□□ 0.67
PCM1-206ENST00000518537 KAT14Q9H8E8 782 aa19.23■□□□□ 0.67
PCM1-206ENST00000518537 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 LINC00301Q8NCQ3 95 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 SLC44A5Q8NCS7 719 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCM1-206ENST00000518537 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 MMP1P03956 469 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.677e-8■■■■□ 21.3
PCM1-206ENST00000518537 ANO1Q5XXA6 986 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 DGKHQ86XP1 1220 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 KCNG4Q8TDN1 519 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 TNMDQ9H2S6 317 aa19.22■□□□□ 0.67
PCM1-206ENST00000518537 PRPF3O43395 683 aaKnown RBP19.21■□□□□ 0.67
PCM1-206ENST00000518537 NR1I2O75469 434 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 RASA1P20936 1047 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 CDK8P49336 464 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 SCNN1DP51172 638 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 MAP3K11Q16584 847 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 CCDC73Q6ZRK6 1079 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 C16orf86Q6ZW13 317 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 TMTC3Q6ZXV5 915 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 RNF214Q8ND24 703 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 PDGFDQ9GZP0 370 aaPredicted RBP19.21■□□□□ 0.67
PCM1-206ENST00000518537 IL17RBQ9NRM6 502 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 TCP11L1Q9NUJ3 509 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 KCNJ14Q9UNX9 436 aa19.21■□□□□ 0.67
PCM1-206ENST00000518537 SPTLC2O15270 562 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 ECE2O60344 883 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 XBP1P17861 261 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 FUT2Q10981 343 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 CAMK4Q16566 473 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 CC2D2BQ6DHV5 1058 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 ANKS1AQ92625 1134 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 CLSTN2Q9H4D0 955 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 PCDHA7Q9UN72 937 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 PICALMQ13492 652 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 HHIPL2Q6UWX4 724 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 TEKT1Q969V4 418 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 USP40Q9NVE5 1235 aa19.2■□□□□ 0.66
PCM1-206ENST00000518537 USP17L3A6NCW0 530 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 USP17L4A6NCW7 530 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 KIF5BP33176 963 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 USP17L1Q7RTZ2 530 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 DIS3L2Q8IYB7 885 aaKnown RBP19.19■□□□□ 0.66
PCM1-206ENST00000518537 SUPT20HQ8NEM7 779 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 C7orf43Q8WVR3 580 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 KCNQ5Q9NR82 932 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 V9GY48 417 aaPredicted RBP19.19■□□□□ 0.66
PCM1-206ENST00000518537 ADALQ6DHV7 355 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 FSIP1Q8NA03 581 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 PNMA1Q8ND90 353 aa19.19■□□□□ 0.66
PCM1-206ENST00000518537 C10orf71Q711Q0 1435 aa19.18■□□□□ 0.66
PCM1-206ENST00000518537 BTBD18B2RXH4 712 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms