RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 BACE1P56817 501 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 TIMM10P62072 90 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 HERVK_113P62684 666 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 XAGE2Q96GT9 111 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 NEUROD6Q96NK8 337 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 APBA2Q99767 749 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 WDR18Q9BV38 432 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 DHX36Q9H2U1 1008 aaKnown RBP11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 GINM1Q9NU53 330 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 PI4KBQ9UBF8 816 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 COL6A3P12111 3177 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 LAMA3Q16787 3333 aa11.18□□□□□ -0.62
LINCR-0001-201ENST00000517732 USP17L10C9JJH3 530 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 ABCB7O75027 752 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 BAG3O95817 575 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 COL6A1P12109 1028 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 PLCG2P16885 1265 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 ERVK-9P63128 1117 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 ERVK-24P63145 666 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 CACNB2Q08289 660 aaPredicted RBP11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 LRRC26Q2I0M4 334 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 FAM109BQ6ICB4 259 aaPredicted RBP11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 GPR142Q7Z601 462 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 PLEKHH3Q7Z736 793 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 CRACR2BQ8N4Y2 399 aaPredicted RBP11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 SPATA5Q8NB90 893 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 NSUN4Q96CB9 384 aaKnown RBP11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 P2RX7Q99572 595 aaKnown RBP11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 PAGR1Q9BTK6 254 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 MYO5AQ9Y4I1 1855 aaKnown RBP11.17□□□□□ -0.62
LINCR-0001-201ENST00000517732 RLFQ13129 1914 aa11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 MSCO60682 206 aa11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 CCND3P30281 292 aaPredicted RBP11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 CCNA1P78396 465 aa11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 API5Q9BZZ5 524 aaKnown RBP11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 HMG20BQ9P0W2 317 aa11.16□□□□□ -0.62
LINCR-0001-201ENST00000517732 ZNF521Q96K83 1311 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 HLA-DOAP06340 250 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 UQCRFS1P1P0C7P4 283 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 TFCP2Q12800 502 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 MAP2K5Q13163 448 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 WDR78Q5VTH9 848 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 FAM161BQ96MY7 647 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 SENP6Q9GZR1 1112 aaPredicted RBP11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 TXNRD2Q9NNW7 524 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 IVNS1ABPQ9Y6Y0 642 aa11.15□□□□□ -0.62
LINCR-0001-201ENST00000517732 MYH8P13535 1937 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 POTEB2H3BUK9 544 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 SRGAP3O43295 1099 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 ARID4AP29374 1257 aaPredicted RBP11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 CNGA1P29973 690 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 RRP1BQ14684 758 aaKnown RBP11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 CCL14Q16627 93 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 MORN1Q5T089 497 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 LHX8Q68G74 356 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 NAA16Q6N069 864 aaPredicted RBP11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 TBC1D9Q6ZT07 1266 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 SH3RF3Q8TEJ3 882 aaPredicted RBP11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 ZNF384Q8TF68 577 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP6NLQ92738 828 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 EDC3Q96F86 508 aaKnown RBP11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 GUCD1Q96NT3 240 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 FEZ1Q99689 392 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 PORCNQ9H237 461 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 AATFQ9NY61 560 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 RBPJLQ9UBG7 517 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
LINCR-0001-201ENST00000517732 PEX10O60683 326 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 GDF11O95390 407 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 GNAI3P08754 354 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 ATP2B2Q01814 1243 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 TGFBRAP1Q8WUH2 860 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 LPAR1Q92633 364 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 DDX20Q9UHI6 824 aaKnown RBP11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 RABGAP1Q9Y3P9 1069 aa11.13□□□□□ -0.63
LINCR-0001-201ENST00000517732 ZNFX1Q9P2E3 1918 aaKnown RBP11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 DNM1LO00429 736 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 ATN1P54259 1190 aaPredicted RBP11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP14P54578 494 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 G3BP1Q13283 466 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINCR-0001-201ENST00000517732 Q3C1V9 767 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms