RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 DNAJC18Q9H819 358 aa17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 PIH1D3Q9NQM4 214 aaKnown RBP17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
SCARNA20.5-201ENST00000516991 IDH1O75874 414 aaKnown RBP17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 HMGCRP04035 888 aa17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 RLBP1P12271 317 aa17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 CYP7A1P22680 504 aa17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 HOXA7P31268 230 aaPredicted RBP17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 GTF3C2Q8WUA4 911 aaPredicted RBP17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 TLR7Q9NYK1 1049 aaKnown RBP17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 ZBTB21Q9ULJ3 1066 aa17.82■□□□□ 0.44
SCARNA20.5-201ENST00000516991 USP17L10C9JJH3 530 aa17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 TFRCP02786 760 aaKnown RBP17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 EAF2Q96CJ1 260 aaPredicted RBP17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 DEFB118Q96PH6 123 aa17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
SCARNA20.5-201ENST00000516991 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
SCARNA20.5-201ENST00000516991 HSP90AB4PQ58FF6 505 aa17.8■□□□□ 0.44
SCARNA20.5-201ENST00000516991 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
SCARNA20.5-201ENST00000516991 SOCS4Q8WXH5 440 aa17.8■□□□□ 0.44
SCARNA20.5-201ENST00000516991 CRISPLD2Q9H0B8 497 aa17.8■□□□□ 0.44
SCARNA20.5-201ENST00000516991 SAP30BPQ9UHR5 308 aaKnown RBP17.8■□□□□ 0.44
SCARNA20.5-201ENST00000516991 GDF11O95390 407 aa17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 USP5P45974 858 aa17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 HERVK_113P62684 666 aa17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 DYNLL1P63167 89 aaKnown RBP17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 ANKLE1Q8NAG6 615 aa17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 EHD4Q9H223 541 aa17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 PLXNB2O15031 1838 aa17.79■□□□□ 0.44
SCARNA20.5-201ENST00000516991 ZBED9Q6R2W3 1325 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 JAG1P78504 1218 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 USP17L2Q6R6M4 530 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 AACSQ86V21 672 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 MAGEB6Q8N7X4 407 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 MIGA1Q8NAN2 632 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 GJD2Q9UKL4 321 aa17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
SCARNA20.5-201ENST00000516991 RPTORQ8N122 1335 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 EVI5O60447 810 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 MS4A1P11836 297 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 MAPK4P31152 587 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 TTC6Q86TZ1 520 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 TRMT44Q8IYL2 757 aaKnown RBP17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 P2RX7Q99572 595 aaKnown RBP17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 HMX1Q9NP08 348 aaPredicted RBP17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 SERPINB13Q9UIV8 391 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.44
SCARNA20.5-201ENST00000516991 NAV1Q8NEY1 1877 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 GH2P01242 217 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 XRCC5P13010 732 aaKnown RBP17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 TTF1Q15361 905 aaPredicted RBP17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 TATDN1Q6P1N9 297 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 NECAB2Q7Z6G3 386 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 C12orf42Q96LP6 360 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 FEZ1Q99689 392 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 NUDT12Q9BQG2 462 aa17.76■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ERVK-9P63128 1117 aa17.75■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ERVK-24P63145 666 aa17.75■□□□□ 0.43
SCARNA20.5-201ENST00000516991 SHROOM1Q2M3G4 852 aaPredicted RBP17.75■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RBM27Q9P2N5 1060 aaKnown RBP17.75■□□□□ 0.43
SCARNA20.5-201ENST00000516991 A0A1W2PPC1 479 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP14P54578 494 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 MIER1Q8N108 512 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 TRIB2Q92519 343 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PAWRQ96IZ0 340 aaKnown RBP17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PRO3102Q9H379 93 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ANTXR1Q9H6X2 564 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 TXNRD2Q9NNW7 524 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 EMILIN3Q9NT22 766 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ALPK3Q96L96 1907 aa17.74■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L15C9J2P7 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L13C9JLJ4 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L11C9JVI0 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L18D6R9N7 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L22D6RA61 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L17D6RBQ6 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L19D6RCP7 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L20D6RJB6 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 HMMRO75330 724 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 ZKSCAN1P17029 563 aaPredicted RBP17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CYP2B6P20813 491 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 USP17L24Q0WX57 530 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CERKLQ49MI3 558 aaPredicted RBP17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RHPN1Q8TCX5 695 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PANK1Q8TE04 598 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 PAGR1Q9BTK6 254 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 CABP5Q9NP86 173 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 RBPJLQ9UBG7 517 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 NDUFB9Q9Y6M9 179 aa17.73■□□□□ 0.43
SCARNA20.5-201ENST00000516991 MAGEB6P1A0A0J9YX57 407 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms