RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 MYO5AQ9Y4I1 1855 aaKnown RBP18.4■□□□□ 0.54
DDR1-278ENST00000515233 A0A1W2PPC1 479 aa18.4■□□□□ 0.54
DDR1-278ENST00000515233 USP17L10C9JJH3 530 aa18.4■□□□□ 0.54
DDR1-278ENST00000515233 ZAP70P43403 619 aa18.4■□□□□ 0.54
DDR1-278ENST00000515233 OS9Q13438 667 aaPredicted RBP18.4■□□□□ 0.54
DDR1-278ENST00000515233 NECAB2Q7Z6G3 386 aa18.4■□□□□ 0.54
DDR1-278ENST00000515233 PAWRQ96IZ0 340 aaKnown RBP18.4■□□□□ 0.54
DDR1-278ENST00000515233 P2RX7Q99572 595 aaKnown RBP18.4■□□□□ 0.54
DDR1-278ENST00000515233 HMX1Q9NP08 348 aaPredicted RBP18.4■□□□□ 0.54
DDR1-278ENST00000515233 PALD1Q9ULE6 856 aa18.4■□□□□ 0.54
DDR1-278ENST00000515233 IRX3P78415 501 aaPredicted RBP18.39■□□□□ 0.53
DDR1-278ENST00000515233 CRACR2BQ8N4Y2 399 aaPredicted RBP18.39■□□□□ 0.53
DDR1-278ENST00000515233 SZT2Q5T011 3432 aa18.39■□□□□ 0.53
DDR1-278ENST00000515233 PLXNB2O15031 1838 aa18.39■□□□□ 0.53
DDR1-278ENST00000515233 RANBP2P49792 3224 aaKnown RBP18.39■□□□□ 0.53
DDR1-278ENST00000515233 HLA-DOAP06340 250 aa18.38■□□□□ 0.53
DDR1-278ENST00000515233 XRCC5P13010 732 aaKnown RBP18.38■□□□□ 0.53
DDR1-278ENST00000515233 HERVK_113P62684 666 aa18.38■□□□□ 0.53
DDR1-278ENST00000515233 CERS3Q8IU89 383 aa18.38■□□□□ 0.53
DDR1-278ENST00000515233 GPRC5AQ8NFJ5 357 aa18.38■□□□□ 0.53
DDR1-278ENST00000515233 TRIM34Q9BYJ4 488 aa18.38■□□□□ 0.53
DDR1-278ENST00000515233 PIH1D3Q9NQM4 214 aaKnown RBP18.38■□□□□ 0.53
DDR1-278ENST00000515233 RBPJLQ9UBG7 517 aa18.38■□□□□ 0.53
DDR1-278ENST00000515233 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
DDR1-278ENST00000515233 GDF11O95390 407 aa18.37■□□□□ 0.53
DDR1-278ENST00000515233 TMED8Q6PL24 325 aaPredicted RBP18.37■□□□□ 0.53
DDR1-278ENST00000515233 TRIB2Q92519 343 aa18.37■□□□□ 0.53
DDR1-278ENST00000515233 EAF2Q96CJ1 260 aaPredicted RBP18.37■□□□□ 0.53
DDR1-278ENST00000515233 TXNRD2Q9NNW7 524 aa18.37■□□□□ 0.53
DDR1-278ENST00000515233 ZBTB21Q9ULJ3 1066 aa18.37■□□□□ 0.53
DDR1-278ENST00000515233 CYP7A1P22680 504 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 DYNLL1P63167 89 aaKnown RBP18.36■□□□□ 0.53
DDR1-278ENST00000515233 TRIM32Q13049 653 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 MAP3K21Q5TCX8 1036 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 TATDN1Q6P1N9 297 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 DIS3LQ8TF46 1054 aaKnown RBP18.36■□□□□ 0.53
DDR1-278ENST00000515233 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
DDR1-278ENST00000515233 SOCS4Q8WXH5 440 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 NUDT12Q9BQG2 462 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 CCDC8Q9H0W5 538 aaPredicted RBP18.36■□□□□ 0.53
DDR1-278ENST00000515233 EMILIN3Q9NT22 766 aa18.36■□□□□ 0.53
DDR1-278ENST00000515233 CYP2B6P20813 491 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 MAPK4P31152 587 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 SHROOM1Q2M3G4 852 aaPredicted RBP18.35■□□□□ 0.53
DDR1-278ENST00000515233 Q3C1V9 767 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
DDR1-278ENST00000515233 NBPF3Q9H094 633 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 C1orf115Q9H7X2 142 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 TLR7Q9NYK1 1049 aaKnown RBP18.35■□□□□ 0.53
DDR1-278ENST00000515233 SAP30BPQ9UHR5 308 aaKnown RBP18.35■□□□□ 0.53
DDR1-278ENST00000515233 OGDHLQ9ULD0 1010 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 ALPK3Q96L96 1907 aa18.35■□□□□ 0.53
DDR1-278ENST00000515233 MYH1P12882 1939 aa18.34■□□□□ 0.53
DDR1-278ENST00000515233 MNX1P50219 401 aaPredicted RBP18.34■□□□□ 0.53
DDR1-278ENST00000515233 USP17L2Q6R6M4 530 aa18.34■□□□□ 0.53
DDR1-278ENST00000515233 FTSJ3Q8IY81 847 aaKnown RBP18.34■□□□□ 0.53
DDR1-278ENST00000515233 USP6NLQ92738 828 aa18.34■□□□□ 0.53
DDR1-278ENST00000515233 C12orf42Q96LP6 360 aa18.34■□□□□ 0.53
DDR1-278ENST00000515233 EHD4Q9H223 541 aa18.34■□□□□ 0.53
DDR1-278ENST00000515233 STAP2Q9UGK3 403 aa18.34■□□□□ 0.53
DDR1-278ENST00000515233 PEX10O60683 326 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.52
DDR1-278ENST00000515233 BMP8BP34820 402 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 ERVK-9P63128 1117 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 ERVK-24P63145 666 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 POTEEQ6S8J3 1075 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 ITPRIPQ8IWB1 547 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.52
DDR1-278ENST00000515233 GH2P01242 217 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 RLBP1P12271 317 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 USP5P45974 858 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 PDE3AQ14432 1141 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 MORN1Q5T089 497 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 TTC6Q86TZ1 520 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 MAGEB6Q8N7X4 407 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 MIGA1Q8NAN2 632 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 GDF15Q99988 308 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 C11orf49Q9H6J7 331 aa18.32■□□□□ 0.52
DDR1-278ENST00000515233 PRKAR2AP13861 404 aaKnown RBP18.31■□□□□ 0.52
DDR1-278ENST00000515233 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 CEP85Q6P2H3 762 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 GPR142Q7Z601 462 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 ERC1Q8IUD2 1116 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 CCAR1Q8IX12 1150 aaKnown RBP18.31■□□□□ 0.52
DDR1-278ENST00000515233 PORCNQ9H237 461 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 ANTXR1Q9H6X2 564 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
DDR1-278ENST00000515233 USP17L15C9J2P7 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L13C9JLJ4 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L11C9JVI0 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L18D6R9N7 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L22D6RA61 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L17D6RBQ6 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L19D6RCP7 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L20D6RJB6 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 RGS2P41220 211 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP14P54578 494 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 CACNB2Q08289 660 aaPredicted RBP18.3■□□□□ 0.52
DDR1-278ENST00000515233 USP17L24Q0WX57 530 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 CERKLQ49MI3 558 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms