RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 USP17L10C9JJH3 530 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 ANP32CO43423 234 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 MSCO60682 206 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 CCND3P30281 292 aaPredicted RBP12.58□□□□□ -0.4
DDR1-276ENST00000514534 TIMM10P62072 90 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 ERVK-9P63128 1117 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 ERVK-24P63145 666 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 GPR142Q7Z601 462 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 PLEKHH3Q7Z736 793 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 USP6NLQ92738 828 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
DDR1-276ENST00000514534 XAGE2Q96GT9 111 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 PA2G4Q9UQ80 394 aaKnown RBP12.58□□□□□ -0.4
DDR1-276ENST00000514534 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
DDR1-276ENST00000514534 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
DDR1-276ENST00000514534 CCNA1P78396 465 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 RRP1BQ14684 758 aaKnown RBP12.57□□□□□ -0.4
DDR1-276ENST00000514534 ALDH1L2Q3SY69 923 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 MORN1Q5T089 497 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 MFSD14CQ5VZR4 134 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 PAGR1Q9BTK6 254 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
DDR1-276ENST00000514534 TXNRD2Q9NNW7 524 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
DDR1-276ENST00000514534 LTBP2Q14767 1821 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 FOCADQ5VW36 1801 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 BAG3O95817 575 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 PLCG2P16885 1265 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 CCL14Q16627 93 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 FOXP4Q8IVH2 680 aaPredicted RBP12.56□□□□□ -0.4
DDR1-276ENST00000514534 CRACR2BQ8N4Y2 399 aaPredicted RBP12.56□□□□□ -0.4
DDR1-276ENST00000514534 ZNF384Q8TF68 577 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 EDC3Q96F86 508 aaKnown RBP12.56□□□□□ -0.4
DDR1-276ENST00000514534 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 PORCNQ9H237 461 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 RBPJLQ9UBG7 517 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 CDK5RAP2Q96SN8 1893 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
DDR1-276ENST00000514534 E9PSI1 815 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 MAP2K5Q13163 448 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 Q3C1V9 767 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 USP17L2Q6R6M4 530 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 LPAR1Q92633 364 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 NEUROD6Q96NK8 337 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
DDR1-276ENST00000514534 DDX20Q9UHI6 824 aaKnown RBP12.55□□□□□ -0.4
DDR1-276ENST00000514534 DNM1LO00429 736 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 PEX10O60683 326 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 TFCP2Q12800 502 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 MAFAQ8NHW3 353 aaPredicted RBP12.54□□□□□ -0.4
DDR1-276ENST00000514534 SYMPKQ92797 1274 aaKnown RBP12.54□□□□□ -0.4
DDR1-276ENST00000514534 SMC4Q9NTJ3 1288 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 LRP2BPQ9P2M1 347 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 RLFQ13129 1914 aa12.54□□□□□ -0.4
DDR1-276ENST00000514534 SLC15A5A6NIM6 579 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 HLA-DOAP06340 250 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 ARID4AP29374 1257 aaPredicted RBP12.53□□□□□ -0.4
DDR1-276ENST00000514534 CNGA1P29973 690 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
DDR1-276ENST00000514534 NAA16Q6N069 864 aaPredicted RBP12.53□□□□□ -0.4
DDR1-276ENST00000514534 ATF7IPQ6VMQ6 1270 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 TBC1D9Q6ZT07 1266 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
DDR1-276ENST00000514534 SH3RF3Q8TEJ3 882 aaPredicted RBP12.53□□□□□ -0.4
DDR1-276ENST00000514534 CDX2Q99626 313 aaPredicted RBP12.53□□□□□ -0.4
DDR1-276ENST00000514534 PRDM6Q9NQX0 595 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 AATFQ9NY61 560 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDR1-276ENST00000514534 ZBTB21Q9ULJ3 1066 aa12.53□□□□□ -0.4
DDR1-276ENST00000514534 UNC80Q8N2C7 3258 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L15C9J2P7 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L13C9JLJ4 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L11C9JVI0 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L18D6R9N7 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L22D6RA61 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L17D6RBQ6 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L19D6RCP7 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L20D6RJB6 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 IGSF3O75054 1194 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 GDF11O95390 407 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 HOXC6P09630 235 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 UQCRFS1P1P0C7P4 283 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 PTPREP23469 700 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 RTP1P59025 263 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 ATP2B2Q01814 1243 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 USP17L24Q0WX57 530 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 WDR78Q5VTH9 848 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 PI16Q6UXB8 463 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 ARRDC4Q8NCT1 418 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 TGFBRAP1Q8WUH2 860 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 C12orf42Q96LP6 360 aa12.52□□□□□ -0.41
DDR1-276ENST00000514534 API5Q9BZZ5 524 aaKnown RBP12.52□□□□□ -0.41
DDR1-276ENST00000514534 SEMA6BQ9H3T3 888 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms