RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 GAS2L3Q86XJ1 694 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 FANCFQ9NPI8 374 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 PSD3Q9NYI0 1048 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 SCHIP1Q9P0W5 487 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 ZKSCAN5Q9Y2L8 839 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 USP54Q70EL1 1684 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 IFRD1O00458 451 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 VPS53Q5VIR6 699 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 TSHZ3Q63HK5 1081 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 GALNT17Q6IS24 598 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 ATF7IPQ6VMQ6 1270 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 VPS8Q8N3P4 1428 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 NEK11Q8NG66 645 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 BICC1Q9H694 974 aaKnown RBP8.23□□□□□ -1.09
NIPBL-208ENST00000514335 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 TIMM22Q9Y584 194 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 EID1Q9Y6B2 187 aa8.23□□□□□ -1.09
NIPBL-208ENST00000514335 TNS1Q9HBL0 1735 aaKnown RBP8.22□□□□□ -1.09
NIPBL-208ENST00000514335 ENO4A6NNW6 628 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 SMTNL1A8MU46 457 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 BIN1O00499 593 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 LSM1O15116 133 aaKnown RBP8.22□□□□□ -1.09
NIPBL-208ENST00000514335 PCNAP12004 261 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 GNALP38405 381 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 SPDYCQ5MJ68 293 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 NANOGNBQ7Z5D8 188 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 FAM81AQ8TBF8 368 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 HAUS7Q99871 368 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 DAPK1P53355 1430 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 GYS1P13807 737 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 RPL13P26373 211 aaKnown RBP8.22□□□□□ -1.09
NIPBL-208ENST00000514335 TAOK1Q7L7X3 1001 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 C11orf74Q86VG3 221 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 ERMNQ8TAM6 284 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 CTNNBL1Q8WYA6 563 aaPredicted RBP8.22□□□□□ -1.09
NIPBL-208ENST00000514335 CDK5RAP3Q96JB5 506 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 ST7Q9NRC1 585 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 SLC5A4Q9NY91 659 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 CFDP1Q9UEE9 299 aaPredicted RBP8.22□□□□□ -1.09
NIPBL-208ENST00000514335 RABGAP1Q9Y3P9 1069 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 KIF1BO60333 1816 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 PPLO60437 1756 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 PLCH1Q4KWH8 1693 aa8.22□□□□□ -1.09
NIPBL-208ENST00000514335 KATNA1O75449 491 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 POLD2P49005 469 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 MRPL28Q13084 256 aaKnown RBP8.21□□□□□ -1.09
NIPBL-208ENST00000514335 LRP8Q14114 963 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 WASHC4Q2M389 1173 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 MUM1Q2TAK8 710 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 BRSK2Q8IWQ3 736 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 NBPF15Q8N660 670 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.21□□□□□ -1.09
NIPBL-208ENST00000514335 SPAG5Q96R06 1193 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 ZSWIM4Q9H7M6 989 aa8.21□□□□□ -1.09
NIPBL-208ENST00000514335 COL14A1Q05707 1796 aaKnown RBP8.21□□□□□ -1.1
NIPBL-208ENST00000514335 EVC2Q86UK5 1308 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 GTPBP10A4D1E9 387 aaKnown RBP8.21□□□□□ -1.1
NIPBL-208ENST00000514335 M0R2C6 588 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 TBX3O15119 743 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 PAHP00439 452 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 SKIV2L2P42285 1042 aaKnown RBP8.21□□□□□ -1.1
NIPBL-208ENST00000514335 BNIP1Q12981 228 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 CRYMQ14894 314 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 RABEP1Q15276 862 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 SLAIN1Q8ND83 568 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 CTCFLQ8NI51 663 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-208ENST00000514335 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.21□□□□□ -1.1
NIPBL-208ENST00000514335 TPCN1Q9ULQ1 816 aa8.21□□□□□ -1.1
NIPBL-208ENST00000514335 TNFRSF10BO14763 440 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
NIPBL-208ENST00000514335 COL6A1P12109 1028 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 KAZNQ674X7 775 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 OSTM1Q86WC4 334 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 TNIP2Q8NFZ5 429 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 EXOC4Q96A65 974 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 MYO5BQ9ULV0 1848 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 TBCAO75347 108 aaKnown RBP8.2□□□□□ -1.1
NIPBL-208ENST00000514335 BAIAP3O94812 1187 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 CENPAP49450 140 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 NLRP12P59046 1061 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 IFFO2Q5TF58 517 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 EMC10Q5UCC4 262 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 CPLX2Q6PUV4 134 aaKnown RBP8.2□□□□□ -1.1
NIPBL-208ENST00000514335 TAS1R3Q7RTX0 852 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
NIPBL-208ENST00000514335 PPM1EQ8WY54 764 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 ZNHIT6Q9NWK9 470 aaKnown RBP8.2□□□□□ -1.1
NIPBL-208ENST00000514335 BCL9O00512 1426 aa8.2□□□□□ -1.1
NIPBL-208ENST00000514335 PRLRP16471 622 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 MCM5P33992 734 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 MAP7D1Q3KQU3 841 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 CYP26C1Q6V0L0 522 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 SEPT14Q6ZU15 432 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 RTL10Q7L3V2 364 aa8.19□□□□□ -1.1
NIPBL-208ENST00000514335 SGCDQ92629 289 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms