RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 SCYL3Q8IZE3 742 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 SMCR8Q8TEV9 937 aaPredicted RBP11.44□□□□□ -0.58
SH3D19-209ENST00000514013 TRIB2Q92519 343 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 OGDHLQ9ULD0 1010 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 PCDHGA10Q9Y5H3 936 aa11.44□□□□□ -0.58
SH3D19-209ENST00000514013 DOCK3Q8IZD9 2030 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 MROH5Q6ZUA9 1318 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 TRIM75PA6NK02 468 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 COL9A1P20849 921 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 PRDX5P30044 214 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 LRRC26Q2I0M4 334 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 MAP3K21Q5TCX8 1036 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 FAM109BQ6ICB4 259 aaPredicted RBP11.43□□□□□ -0.58
SH3D19-209ENST00000514013 KLHDC4Q8TBB5 520 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 COA7Q96BR5 231 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 SUGT1Q9Y2Z0 365 aa11.43□□□□□ -0.58
SH3D19-209ENST00000514013 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 MAST3O60307 1309 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 PEX10O60683 326 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 VAMP4O75379 141 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 NBPF7P0C2Y1 421 aaPredicted RBP11.42□□□□□ -0.58
SH3D19-209ENST00000514013 DDX10Q13206 875 aaKnown RBP11.42□□□□□ -0.58
SH3D19-209ENST00000514013 FAM110CQ1W6H9 321 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 METTL24Q5JXM2 366 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 Q6ZNB5 142 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 LAPTM4BQ86VI4 370 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 WWC1Q8IX03 1113 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
SH3D19-209ENST00000514013 RAPGEFL1Q9UHV5 662 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 AGTPBP1Q9UPW5 1226 aa11.42□□□□□ -0.58
SH3D19-209ENST00000514013 PDE8BO95263 885 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 FGFR2P21802 821 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 RGS3P49796 1198 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 CAVIN4Q5BKX8 364 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 NYAP1Q6ZVC0 841 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 CDX2Q99626 313 aaPredicted RBP11.41□□□□□ -0.58
SH3D19-209ENST00000514013 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
SH3D19-209ENST00000514013 PICK1Q9NRD5 415 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 USP40Q9NVE5 1235 aa11.41□□□□□ -0.58
SH3D19-209ENST00000514013 DDTLA6NHG4 134 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-209ENST00000514013 MAP3K10Q02779 954 aa11.4□□□□□ -0.58
SH3D19-209ENST00000514013 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-209ENST00000514013 DDX4Q9NQI0 724 aaKnown RBP11.4□□□□□ -0.58
SH3D19-209ENST00000514013 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
SH3D19-209ENST00000514013 C9orf78Q9NZ63 289 aaPredicted RBP11.4□□□□□ -0.58
SH3D19-209ENST00000514013 PTPRFP10586 1907 aa11.4□□□□□ -0.58
SH3D19-209ENST00000514013 DNAH12Q6ZR08 3092 aa11.39□□□□□ -0.59
SH3D19-209ENST00000514013 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
SH3D19-209ENST00000514013 CYP2B6P20813 491 aa11.39□□□□□ -0.59
SH3D19-209ENST00000514013 MFSD10Q14728 455 aa11.39□□□□□ -0.59
SH3D19-209ENST00000514013 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
SH3D19-209ENST00000514013 MAFAQ8NHW3 353 aaPredicted RBP11.39□□□□□ -0.59
SH3D19-209ENST00000514013 PLXNB2O15031 1838 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 ALDH1L1O75891 902 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 CCND3P30281 292 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 RRP1BQ14684 758 aaKnown RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 CCDC27Q2M243 656 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 WDR66Q8TBY9 1149 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 MYLIPQ8WY64 445 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 IDI2Q9BXS1 227 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
SH3D19-209ENST00000514013 LRRFIP2Q9Y608 721 aaKnown RBP11.38□□□□□ -0.59
SH3D19-209ENST00000514013 UTYO14607 1347 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 KIF16BQ96L93 1317 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 CTNND1O60716 968 aaKnown RBP11.37□□□□□ -0.59
SH3D19-209ENST00000514013 ENTPD3O75355 529 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 HMGCS2P54868 508 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 KCNC4Q03721 635 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 CACNB2Q08289 660 aaPredicted RBP11.37□□□□□ -0.59
SH3D19-209ENST00000514013 SPP2Q13103 211 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
SH3D19-209ENST00000514013 CCL14Q16627 93 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 ZNF697Q5TEC3 545 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 ASCC2Q9H1I8 757 aaPredicted RBP11.37□□□□□ -0.59
SH3D19-209ENST00000514013 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 TXNRD2Q9NNW7 524 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
SH3D19-209ENST00000514013 GAKO14976 1311 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 IL16Q14005 1332 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 DOCK1Q14185 1865 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 IFIT1P09914 478 aaKnown RBP11.36□□□□□ -0.59
SH3D19-209ENST00000514013 GCLCP48506 637 aaPredicted RBP11.36□□□□□ -0.59
SH3D19-209ENST00000514013 C9orf50Q5SZB4 431 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 SRCIN1Q9C0H9 1055 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 MORF4L1Q9UBU8 362 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
SH3D19-209ENST00000514013 BDP1A6H8Y1 2624 aa11.35□□□□□ -0.59
SH3D19-209ENST00000514013 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
SH3D19-209ENST00000514013 LDHBP07195 334 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms