RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
CAST-239ENST00000513666 PICALMQ13492 652 aa11.21□□□□□ -0.61
CAST-239ENST00000513666 SH3D19Q5HYK7 790 aa11.21□□□□□ -0.61
CAST-239ENST00000513666 MAFAQ8NHW3 353 aaPredicted RBP11.21□□□□□ -0.61
CAST-239ENST00000513666 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
CAST-239ENST00000513666 CDX2Q99626 313 aaPredicted RBP11.21□□□□□ -0.61
CAST-239ENST00000513666 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
CAST-239ENST00000513666 NUDT12Q9BQG2 462 aa11.21□□□□□ -0.61
CAST-239ENST00000513666 FRMPD3Q5JV73 1810 aa11.21□□□□□ -0.62
CAST-239ENST00000513666 ZKSCAN1P17029 563 aaPredicted RBP11.2□□□□□ -0.62
CAST-239ENST00000513666 ATG9AQ7Z3C6 839 aa11.2□□□□□ -0.62
CAST-239ENST00000513666 SLF2Q8IX21 1173 aa11.2□□□□□ -0.62
CAST-239ENST00000513666 ZGPATQ8N5A5 531 aaKnown RBP11.2□□□□□ -0.62
CAST-239ENST00000513666 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
CAST-239ENST00000513666 DNAH12Q6ZR08 3092 aa11.2□□□□□ -0.62
CAST-239ENST00000513666 EYSQ5T1H1 3165 aa11.2□□□□□ -0.62
CAST-239ENST00000513666 FAM196BA6NMK8 535 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
CAST-239ENST00000513666 BTDP43251 543 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 PHKA1P46020 1223 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 ATP2B3Q16720 1220 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
CAST-239ENST00000513666 USP6NLQ92738 828 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 LTBP2Q14767 1821 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 PRUNE2Q8WUY3 3088 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 USP17L5A8MUK1 530 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 MAPK4P31152 587 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 CAP2P40123 477 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 IRX3P78415 501 aaPredicted RBP11.19□□□□□ -0.62
CAST-239ENST00000513666 PDE3AQ14432 1141 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 GPRC5AQ8NFJ5 357 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
CAST-239ENST00000513666 USP44Q9H0E7 712 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 SEMA6BQ9H3T3 888 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 TXNRD2Q9NNW7 524 aa11.19□□□□□ -0.62
CAST-239ENST00000513666 MROH7-TTC4A0A0A0MT08 1334 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
CAST-239ENST00000513666 RGS2P41220 211 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 RHBDL3P58872 404 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 RRP1BQ14684 758 aaKnown RBP11.18□□□□□ -0.62
CAST-239ENST00000513666 CCL14Q16627 93 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 MORN1Q5T089 497 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 P2RX7Q99572 595 aaKnown RBP11.18□□□□□ -0.62
CAST-239ENST00000513666 APBA2Q99767 749 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 SENP6Q9GZR1 1112 aaPredicted RBP11.18□□□□□ -0.62
CAST-239ENST00000513666 AS3MTQ9HBK9 375 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 CEP126Q9P2H0 1117 aa11.18□□□□□ -0.62
CAST-239ENST00000513666 PDS5AQ29RF7 1337 aaKnown RBP11.17□□□□□ -0.62
CAST-239ENST00000513666 GPR75-ASB3A0A0A6YYF3 556 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 PEX10O60683 326 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 CIAO1O76071 339 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 HERVK_113P62684 666 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 SPTY2D1Q68D10 685 aaPredicted RBP11.17□□□□□ -0.62
CAST-239ENST00000513666 MYLIPQ8WY64 445 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 WDR18Q9BV38 432 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 ABCF2Q9UG63 623 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 PRKAG2Q9UGJ0 569 aa11.17□□□□□ -0.62
CAST-239ENST00000513666 SALL2Q9Y467 1007 aaPredicted RBP11.17□□□□□ -0.62
CAST-239ENST00000513666 MAP4K4O95819 1239 aaPredicted RBP11.16□□□□□ -0.62
CAST-239ENST00000513666 COL9A1P20849 921 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 BACE1P56817 501 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 MTMR2Q13614 643 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 RASGRF1Q13972 1273 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 SHHQ15465 462 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 CCDC102BQ68D86 513 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 GPR142Q7Z601 462 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 PLEKHH3Q7Z736 793 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 SIL1Q9H173 461 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 PORCNQ9H237 461 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 TTYH1Q9H313 450 aaPredicted RBP11.16□□□□□ -0.62
CAST-239ENST00000513666 TMOD4Q9NZQ9 345 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 RBPJLQ9UBG7 517 aa11.16□□□□□ -0.62
CAST-239ENST00000513666 ADORA1P30542 326 aa11.15□□□□□ -0.62
CAST-239ENST00000513666 RTP1P59025 263 aa11.15□□□□□ -0.62
CAST-239ENST00000513666 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
CAST-239ENST00000513666 ERVK-24P63145 666 aa11.15□□□□□ -0.62
CAST-239ENST00000513666 SMAD3P84022 425 aaKnown RBP11.15□□□□□ -0.62
CAST-239ENST00000513666 MECOMQ03112 1051 aa11.15□□□□□ -0.62
CAST-239ENST00000513666 Q3C1V9 767 aa11.15□□□□□ -0.62
CAST-239ENST00000513666 CCAR1Q8IX12 1150 aaKnown RBP11.15□□□□□ -0.62
CAST-239ENST00000513666 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
CAST-239ENST00000513666 GTF3C2Q8WUA4 911 aaPredicted RBP11.15□□□□□ -0.62
CAST-239ENST00000513666 HERC5Q9UII4 1024 aaKnown RBP11.15□□□□□ -0.62
CAST-239ENST00000513666 C19orf81C9J6K1 198 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 MSCO60682 206 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 FOSL2P15408 326 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 MAP2K5Q13163 448 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 C9orf50Q5SZB4 431 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 MFSD14CQ5VZR4 134 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 ZNF384Q8TF68 577 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 LPAR1Q92633 364 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
CAST-239ENST00000513666 PTPRCP08575 1304 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 RLFQ13129 1914 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 SIPA1L1O43166 1804 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 DNM1LO00429 736 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 ASNSP08243 561 aa11.14□□□□□ -0.63
CAST-239ENST00000513666 IL15P40933 162 aaPredicted RBP11.14□□□□□ -0.63
CAST-239ENST00000513666 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms