RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
TCOF1-212ENST00000513538 BMP8BP34820 402 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 PPP4CP60510 307 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 HERVK_113P62684 666 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 Q3C1V9 767 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 METTL16Q86W50 562 aaKnown RBP11.87□□□□□ -0.51
TCOF1-212ENST00000513538 TGFBRAP1Q8WUH2 860 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 PORCNQ9H237 461 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 AS3MTQ9HBK9 375 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 LRP2BPQ9P2M1 347 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 RBPJLQ9UBG7 517 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 ZBTB21Q9ULJ3 1066 aa11.87□□□□□ -0.51
TCOF1-212ENST00000513538 BCAR3O75815 825 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 GNAI2P04899 355 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 CYP2E1P05181 493 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-212ENST00000513538 ASNSP08243 561 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 UQCRFS1P1P0C7P4 283 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 MAGEA10P43363 369 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-212ENST00000513538 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-212ENST00000513538 CCL14Q16627 93 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 NAA16Q6N069 864 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-212ENST00000513538 SLC17A8Q8NDX2 589 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 USP6NLQ92738 828 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 DHX36Q9H2U1 1008 aaKnown RBP11.86□□□□□ -0.51
TCOF1-212ENST00000513538 C11orf49Q9H6J7 331 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 PIH1D3Q9NQM4 214 aaKnown RBP11.86□□□□□ -0.51
TCOF1-212ENST00000513538 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
TCOF1-212ENST00000513538 DLL1O00548 723 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 COL6A1P12109 1028 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 CCND3P30281 292 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 DYNLL1P63167 89 aaKnown RBP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 G3BP1Q13283 466 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 POLA2Q14181 598 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 TNNI3KQ59H18 835 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 MORN1Q5T089 497 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 Q7L0L9 218 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 GPRC5AQ8NFJ5 357 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 NUDT12Q9BQG2 462 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 TLR7Q9NYK1 1049 aaKnown RBP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 TMOD4Q9NZQ9 345 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 SAP30BPQ9UHR5 308 aaKnown RBP11.85□□□□□ -0.51
TCOF1-212ENST00000513538 FPGT-TNNI3KV9GXZ4 949 aa11.85□□□□□ -0.51
TCOF1-212ENST00000513538 CNMDO75829 334 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 ZAP70P43403 619 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 ERVK-9P63128 1117 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 ERVK-24P63145 666 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 TTC39AQ5SRH9 613 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 LHX8Q68G74 356 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 GPR142Q7Z601 462 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 TMEM57Q8N5G2 664 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 SOCS4Q8WXH5 440 aa11.84□□□□□ -0.51
TCOF1-212ENST00000513538 NOL10Q9BSC4 688 aaKnown RBP11.84□□□□□ -0.51
TCOF1-212ENST00000513538 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
TCOF1-212ENST00000513538 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 C19orf81C9J6K1 198 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 BAG3O95817 575 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 PLCG2P16885 1265 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 ZKSCAN1P17029 563 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-212ENST00000513538 MAPK4P31152 587 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 FOXP4Q8IVH2 680 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-212ENST00000513538 CRACR2BQ8N4Y2 399 aaPredicted RBP11.83□□□□□ -0.52
TCOF1-212ENST00000513538 DEFB123Q8N688 67 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 PAGR1Q9BTK6 254 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 FLRT1Q9NZU1 646 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 LTBP2Q14767 1821 aa11.83□□□□□ -0.52
TCOF1-212ENST00000513538 RLFQ13129 1914 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 GH2P01242 217 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 USP17L2Q6R6M4 530 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-212ENST00000513538 ZNF512BQ96KM6 892 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-212ENST00000513538 APBA2Q99767 749 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 GINM1Q9NU53 330 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 NDUFB9Q9Y6M9 179 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 A0A0G2JMZ2 1700 aa11.82□□□□□ -0.52
TCOF1-212ENST00000513538 RGS2P41220 211 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 EVX2Q03828 476 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 ZYXQ15942 572 aaKnown RBP11.81□□□□□ -0.52
TCOF1-212ENST00000513538 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 GPR153Q6NV75 609 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 PLEKHH3Q7Z736 793 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 MIGA1Q8NAN2 632 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 ACER1Q8TDN7 264 aa11.81□□□□□ -0.52
TCOF1-212ENST00000513538 C12orf42Q96LP6 360 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms