RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 LRP2BPQ9P2M1 347 aa12.02□□□□□ -0.48
CCL28-203ENST00000513525 DBNLQ9UJU6 430 aaKnown RBP12.02□□□□□ -0.48
CCL28-203ENST00000513525 COG6Q9Y2V7 657 aa12.02□□□□□ -0.48
CCL28-203ENST00000513525 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 CTNND1O60716 968 aaKnown RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 CYP2E1P05181 493 aaPredicted RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 ADGRA2Q96PE1 1338 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 PTPRAP18433 802 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 PPP4CP60510 307 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 LACTBP83111 547 aaPredicted RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 NAA16Q6N069 864 aaPredicted RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 C17orf99Q6UX52 265 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 ERC1Q8IUD2 1116 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 ARMC5Q96C12 935 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 OSBPL5Q9H0X9 879 aaPredicted RBP12.01□□□□□ -0.49
CCL28-203ENST00000513525 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 SNRKQ9NRH2 765 aa12.01□□□□□ -0.49
CCL28-203ENST00000513525 A0A0G2JLL6 359 aaPredicted RBP12□□□□□ -0.49
CCL28-203ENST00000513525 PDHXO00330 501 aa12□□□□□ -0.49
CCL28-203ENST00000513525 BAG3O95817 575 aa12□□□□□ -0.49
CCL28-203ENST00000513525 GNRH1P01148 92 aa12□□□□□ -0.49
CCL28-203ENST00000513525 HSP90AB4PQ58FF6 505 aa12□□□□□ -0.49
CCL28-203ENST00000513525 PRRT2Q7Z6L0 340 aaPredicted RBP12□□□□□ -0.49
CCL28-203ENST00000513525 TEX11Q8IYF3 940 aa12□□□□□ -0.49
CCL28-203ENST00000513525 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
CCL28-203ENST00000513525 TLR7Q9NYK1 1049 aaKnown RBP12□□□□□ -0.49
CCL28-203ENST00000513525 DDX19BQ9UMR2 479 aa12□□□□□ -0.49
CCL28-203ENST00000513525 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
CCL28-203ENST00000513525 SLURP2P0DP57 97 aa11.99□□□□□ -0.49
CCL28-203ENST00000513525 ZAP70P43403 619 aa11.99□□□□□ -0.49
CCL28-203ENST00000513525 KIF22Q14807 665 aa11.99□□□□□ -0.49
CCL28-203ENST00000513525 GPAT2Q6NUI2 795 aa11.99□□□□□ -0.49
CCL28-203ENST00000513525 FASTKD5Q7L8L6 764 aaKnown RBP11.99□□□□□ -0.49
CCL28-203ENST00000513525 SH3RF3Q8TEJ3 882 aaPredicted RBP11.99□□□□□ -0.49
CCL28-203ENST00000513525 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
CCL28-203ENST00000513525 DHX36Q9H2U1 1008 aaKnown RBP11.99□□□□□ -0.49
CCL28-203ENST00000513525 AATFQ9NY61 560 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCL28-203ENST00000513525 ZHX2Q9Y6X8 837 aa11.99□□□□□ -0.49
CCL28-203ENST00000513525 PRMT2P55345 433 aa11.98□□□□□ -0.49
CCL28-203ENST00000513525 TMED8Q6PL24 325 aaPredicted RBP11.98□□□□□ -0.49
CCL28-203ENST00000513525 ADGRA1Q86SQ6 560 aa11.98□□□□□ -0.49
CCL28-203ENST00000513525 RPAP2Q8IXW5 612 aaPredicted RBP11.98□□□□□ -0.49
CCL28-203ENST00000513525 PARK7Q99497 189 aaKnown RBP11.98□□□□□ -0.49
CCL28-203ENST00000513525 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
CCL28-203ENST00000513525 CHMP4BQ9H444 224 aaKnown RBP11.98□□□□□ -0.49
CCL28-203ENST00000513525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCL28-203ENST00000513525 HERC5Q9UII4 1024 aaKnown RBP11.98□□□□□ -0.49
CCL28-203ENST00000513525 EXOC6BQ9Y2D4 811 aa11.98□□□□□ -0.49
CCL28-203ENST00000513525 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
CCL28-203ENST00000513525 BAZ2AQ9UIF9 1905 aaKnown RBP11.98□□□□□ -0.49
CCL28-203ENST00000513525 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 ZNF333Q96JL9 665 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 ARHGAP39Q9C0H5 1083 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 PIH1D3Q9NQM4 214 aaKnown RBP11.97□□□□□ -0.49
CCL28-203ENST00000513525 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 PI4KBQ9UBF8 816 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 CPA4Q9UI42 421 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 PTCH2Q9Y6C5 1203 aa11.97□□□□□ -0.49
CCL28-203ENST00000513525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.96□□□□□ -0.49
CCL28-203ENST00000513525 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 HMMRO75330 724 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 BCRP11274 1271 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 CAP2P40123 477 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 NBPF11Q86T75 865 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 METTL16Q86W50 562 aaKnown RBP11.96□□□□□ -0.49
CCL28-203ENST00000513525 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 ZFP91Q96JP5 570 aaPredicted RBP11.96□□□□□ -0.49
CCL28-203ENST00000513525 RWDD1Q9H446 243 aaPredicted RBP11.96□□□□□ -0.49
CCL28-203ENST00000513525 FLT1P17948 1338 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 PLXNB2O15031 1838 aa11.96□□□□□ -0.49
CCL28-203ENST00000513525 CTGFP29279 349 aa11.96□□□□□ -0.5
CCL28-203ENST00000513525 SLC9C1Q4G0N8 1177 aa11.96□□□□□ -0.5
CCL28-203ENST00000513525 AACSQ86V21 672 aa11.96□□□□□ -0.5
CCL28-203ENST00000513525 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.5
CCL28-203ENST00000513525 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.5
CCL28-203ENST00000513525 KIF1BPQ96EK5 621 aa11.96□□□□□ -0.5
CCL28-203ENST00000513525 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.5
CCL28-203ENST00000513525 TRIM75PA6NK02 468 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
CCL28-203ENST00000513525 IGHDP01880 384 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 CYP2C8P10632 490 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 CYP7A1P22680 504 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 PSMC4P43686 418 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 RRP1BQ14684 758 aaKnown RBP11.95□□□□□ -0.5
CCL28-203ENST00000513525 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
CCL28-203ENST00000513525 MAPKAPK5Q8IW41 473 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCL28-203ENST00000513525 TRIM47Q96LD4 638 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 SRRDQ9UH36 339 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
CCL28-203ENST00000513525 HOXD10P28358 340 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 DYNLL1P63167 89 aaKnown RBP11.94□□□□□ -0.5
CCL28-203ENST00000513525 MAP3K12Q12852 859 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
CCL28-203ENST00000513525 CCDC84Q86UT8 332 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms