RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 CCDC8Q9H0W5 538 aaPredicted RBP30.79■■■□□ 2.52
CLDND1-226ENST00000513287 TMOD4Q9NZQ9 345 aa30.79■■■□□ 2.52
CLDND1-226ENST00000513287 USP17L10C9JJH3 530 aa30.78■■■□□ 2.52
CLDND1-226ENST00000513287 CYP7A1P22680 504 aa30.78■■■□□ 2.52
CLDND1-226ENST00000513287 DPF3Q92784 378 aa30.78■■■□□ 2.52
CLDND1-226ENST00000513287 TRIM34Q9BYJ4 488 aa30.78■■■□□ 2.52
CLDND1-226ENST00000513287 TLR7Q9NYK1 1049 aaKnown RBP30.78■■■□□ 2.52
CLDND1-226ENST00000513287 ZBED9Q6R2W3 1325 aa30.77■■■□□ 2.52
CLDND1-226ENST00000513287 MTMR2Q13614 643 aa30.77■■■□□ 2.52
CLDND1-226ENST00000513287 HSP90AB4PQ58FF6 505 aa30.77■■■□□ 2.52
CLDND1-226ENST00000513287 MIER1Q8N108 512 aa30.77■■■□□ 2.52
CLDND1-226ENST00000513287 EHD4Q9H223 541 aa30.77■■■□□ 2.52
CLDND1-226ENST00000513287 FARP2O94887 1054 aaPredicted RBP30.76■■■□□ 2.51
CLDND1-226ENST00000513287 JAG1P78504 1218 aa30.76■■■□□ 2.51
CLDND1-226ENST00000513287 TATDN1Q6P1N9 297 aa30.76■■■□□ 2.51
CLDND1-226ENST00000513287 GTF3C2Q8WUA4 911 aaPredicted RBP30.76■■■□□ 2.51
CLDND1-226ENST00000513287 ZBTB21Q9ULJ3 1066 aa30.76■■■□□ 2.51
CLDND1-226ENST00000513287 MYH1P12882 1939 aa30.75■■■□□ 2.51
CLDND1-226ENST00000513287 IDH1O75874 414 aaKnown RBP30.75■■■□□ 2.51
CLDND1-226ENST00000513287 MS4A1P11836 297 aa30.75■■■□□ 2.51
CLDND1-226ENST00000513287 IRX3P78415 501 aaPredicted RBP30.75■■■□□ 2.51
CLDND1-226ENST00000513287 MAP3K12Q12852 859 aa30.75■■■□□ 2.51
CLDND1-226ENST00000513287 NR2E3Q9Y5X4 410 aa30.75■■■□□ 2.51
CLDND1-226ENST00000513287 HMGCRP04035 888 aa30.74■■■□□ 2.51
CLDND1-226ENST00000513287 DYNLL1P63167 89 aaKnown RBP30.74■■■□□ 2.51
CLDND1-226ENST00000513287 ANKLE1Q8NAG6 615 aa30.73■■■□□ 2.51
CLDND1-226ENST00000513287 DEFB118Q96PH6 123 aa30.73■■■□□ 2.51
CLDND1-226ENST00000513287 P2RX7Q99572 595 aaKnown RBP30.73■■■□□ 2.51
CLDND1-226ENST00000513287 TFRCP02786 760 aaKnown RBP30.72■■■□□ 2.51
CLDND1-226ENST00000513287 XRCC5P13010 732 aaKnown RBP30.72■■■□□ 2.51
CLDND1-226ENST00000513287 HERVK_113P62684 666 aa30.72■■■□□ 2.51
CLDND1-226ENST00000513287 TTC6Q86TZ1 520 aa30.72■■■□□ 2.51
CLDND1-226ENST00000513287 MAGEB6Q8N7X4 407 aa30.72■■■□□ 2.51
CLDND1-226ENST00000513287 GPRC5AQ8NFJ5 357 aa30.72■■■□□ 2.51
CLDND1-226ENST00000513287 C12orf42Q96LP6 360 aa30.72■■■□□ 2.51
CLDND1-226ENST00000513287 SERPINB13Q9UIV8 391 aa30.72■■■□□ 2.51
CLDND1-226ENST00000513287 PLXNB2O15031 1838 aa30.71■■■□□ 2.51
CLDND1-226ENST00000513287 TTF1Q15361 905 aaPredicted RBP30.71■■■□□ 2.51
CLDND1-226ENST00000513287 USP17L2Q6R6M4 530 aa30.71■■■□□ 2.51
CLDND1-226ENST00000513287 RPTORQ8N122 1335 aa30.71■■■□□ 2.51
CLDND1-226ENST00000513287 GDF11O95390 407 aa30.7■■■□□ 2.51
CLDND1-226ENST00000513287 USP5P45974 858 aa30.7■■■□□ 2.51
CLDND1-226ENST00000513287 AACSQ86V21 672 aa30.7■■■□□ 2.51
CLDND1-226ENST00000513287 RPAP2Q8IXW5 612 aaPredicted RBP30.7■■■□□ 2.51
CLDND1-226ENST00000513287 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.7■■■□□ 2.51
CLDND1-226ENST00000513287 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.7■■■□□ 2.51
CLDND1-226ENST00000513287 PRO3102Q9H379 93 aa30.7■■■□□ 2.51
CLDND1-226ENST00000513287 ANTXR1Q9H6X2 564 aa30.7■■■□□ 2.51
CLDND1-226ENST00000513287 SAP30BPQ9UHR5 308 aaKnown RBP30.7■■■□□ 2.51
CLDND1-226ENST00000513287 EXOC6BQ9Y2D4 811 aa30.7■■■□□ 2.51
CLDND1-226ENST00000513287 TRMT44Q8IYL2 757 aaKnown RBP30.69■■■□□ 2.5
CLDND1-226ENST00000513287 RHPN1Q8TCX5 695 aa30.69■■■□□ 2.5
CLDND1-226ENST00000513287 SOCS4Q8WXH5 440 aa30.69■■■□□ 2.5
CLDND1-226ENST00000513287 EMILIN3Q9NT22 766 aa30.69■■■□□ 2.5
CLDND1-226ENST00000513287 RBPJLQ9UBG7 517 aa30.69■■■□□ 2.5
CLDND1-226ENST00000513287 TRIOBPQ9H2D6 2365 aa30.68■■■□□ 2.5
CLDND1-226ENST00000513287 MAPK4P31152 587 aa30.68■■■□□ 2.5
CLDND1-226ENST00000513287 DIEXFQ68CQ4 756 aaKnown RBP30.68■■■□□ 2.5
CLDND1-226ENST00000513287 MIGA1Q8NAN2 632 aa30.68■■■□□ 2.5
CLDND1-226ENST00000513287 RIOK1Q9BRS2 568 aaKnown RBP30.68■■■□□ 2.5
CLDND1-226ENST00000513287 TXNRD2Q9NNW7 524 aa30.68■■■□□ 2.5
CLDND1-226ENST00000513287 HMX1Q9NP08 348 aaPredicted RBP30.68■■■□□ 2.5
CLDND1-226ENST00000513287 TAOK2Q9UL54 1235 aa30.68■■■□□ 2.5
CLDND1-226ENST00000513287 USP14P54578 494 aa30.67■■■□□ 2.5
CLDND1-226ENST00000513287 PANK1Q8TE04 598 aa30.67■■■□□ 2.5
CLDND1-226ENST00000513287 NUDT12Q9BQG2 462 aa30.67■■■□□ 2.5
CLDND1-226ENST00000513287 GH2P01242 217 aa30.66■■■□□ 2.5
CLDND1-226ENST00000513287 SHROOM1Q2M3G4 852 aaPredicted RBP30.66■■■□□ 2.5
CLDND1-226ENST00000513287 MAP3K21Q5TCX8 1036 aa30.66■■■□□ 2.5
CLDND1-226ENST00000513287 CHRDL2Q6WN34 429 aa30.66■■■□□ 2.5
CLDND1-226ENST00000513287 ERVK-9P63128 1117 aa30.65■■■□□ 2.5
CLDND1-226ENST00000513287 ERVK-24P63145 666 aa30.65■■■□□ 2.5
CLDND1-226ENST00000513287 NECAB2Q7Z6G3 386 aa30.65■■■□□ 2.5
CLDND1-226ENST00000513287 CLASRPQ8N2M8 674 aaKnown RBP30.65■■■□□ 2.5
CLDND1-226ENST00000513287 USP6NLQ92738 828 aa30.65■■■□□ 2.5
CLDND1-226ENST00000513287 KIF1BPQ96EK5 621 aa30.65■■■□□ 2.5
CLDND1-226ENST00000513287 KIAA1683Q9H0B3 1180 aa30.65■■■□□ 2.5
CLDND1-226ENST00000513287 CERKLQ49MI3 558 aaPredicted RBP30.64■■■□□ 2.5
CLDND1-226ENST00000513287 RBM27Q9P2N5 1060 aaKnown RBP30.64■■■□□ 2.5
CLDND1-226ENST00000513287 DDX19BQ9UMR2 479 aa30.64■■■□□ 2.5
CLDND1-226ENST00000513287 NDUFB9Q9Y6M9 179 aa30.64■■■□□ 2.5
CLDND1-226ENST00000513287 A0A1W2PPC1 479 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L15C9J2P7 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L13C9JLJ4 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L11C9JVI0 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L18D6R9N7 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L22D6RA61 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L17D6RBQ6 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L19D6RCP7 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L20D6RJB6 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 EVI5O60447 810 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 HMMRO75330 724 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 USP17L24Q0WX57 530 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 Q3C1V9 767 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 LBX2Q6XYB7 198 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 TRIB2Q92519 343 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 CHMP4BQ9H444 224 aaKnown RBP30.63■■■□□ 2.49
CLDND1-226ENST00000513287 RABGAP1Q9Y3P9 1069 aa30.63■■■□□ 2.49
CLDND1-226ENST00000513287 RANBP2P49792 3224 aaKnown RBP30.62■■■□□ 2.49
CLDND1-226ENST00000513287 DDX60LQ5H9U9 1706 aaKnown RBP30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms