RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 FERMT2Q96AC1 680 aa12.13□□□□□ -0.47
PTPN20-228ENST00000513266 PUS3Q9BZE2 481 aaKnown RBP12.13□□□□□ -0.47
PTPN20-228ENST00000513266 CD320Q9NPF0 282 aa12.13□□□□□ -0.47
PTPN20-228ENST00000513266 USP40Q9NVE5 1235 aa12.13□□□□□ -0.47
PTPN20-228ENST00000513266 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
PTPN20-228ENST00000513266 RFX7Q2KHR2 1363 aa12.13□□□□□ -0.47
PTPN20-228ENST00000513266 USP34Q70CQ2 3546 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-228ENST00000513266 HERVK_113P62684 666 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 IRX3P78415 501 aaPredicted RBP12.12□□□□□ -0.47
PTPN20-228ENST00000513266 CCDC57Q2TAC2 916 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 TAF7LQ5H9L4 462 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 RASIP1Q5U651 963 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 ANO1Q5XXA6 986 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 FBXL18Q96ME1 805 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 MYH16Q9H6N6 1097 aa12.12□□□□□ -0.47
PTPN20-228ENST00000513266 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
PTPN20-228ENST00000513266 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 ENTPD3O75355 529 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 IGHA2P01877 340 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 CYBAP13498 195 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 CYP2C19P33261 490 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 ERVK-24P63145 666 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 TRIM26Q12899 539 aaPredicted RBP12.11□□□□□ -0.47
PTPN20-228ENST00000513266 C16orf59Q7L2K0 433 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
PTPN20-228ENST00000513266 IDI2Q9BXS1 227 aa12.11□□□□□ -0.47
PTPN20-228ENST00000513266 FAM196BA6NMK8 535 aa12.1□□□□□ -0.47
PTPN20-228ENST00000513266 HOXA7P31268 230 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-228ENST00000513266 CAVIN4Q5BKX8 364 aa12.1□□□□□ -0.47
PTPN20-228ENST00000513266 ZSCAN29Q8IWY8 852 aaPredicted RBP12.1□□□□□ -0.47
PTPN20-228ENST00000513266 LINS1Q8NG48 757 aa12.1□□□□□ -0.47
PTPN20-228ENST00000513266 HERVK_113Q902F9 699 aa12.1□□□□□ -0.47
PTPN20-228ENST00000513266 NKX2-4Q9H2Z4 354 aa12.1□□□□□ -0.47
PTPN20-228ENST00000513266 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
PTPN20-228ENST00000513266 ZNFX1Q9P2E3 1918 aaKnown RBP12.09□□□□□ -0.47
PTPN20-228ENST00000513266 MYCNP04198 464 aaPredicted RBP12.09□□□□□ -0.47
PTPN20-228ENST00000513266 PRDX5P30044 214 aa12.09□□□□□ -0.47
PTPN20-228ENST00000513266 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
PTPN20-228ENST00000513266 TMEM240Q5SV17 173 aa12.09□□□□□ -0.47
PTPN20-228ENST00000513266 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
PTPN20-228ENST00000513266 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
PTPN20-228ENST00000513266 DDX4Q9NQI0 724 aaKnown RBP12.09□□□□□ -0.47
PTPN20-228ENST00000513266 YBX2Q9Y2T7 364 aaKnown RBP12.09□□□□□ -0.47
PTPN20-228ENST00000513266 HOXC6P09630 235 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
PTPN20-228ENST00000513266 LRRC41Q15345 812 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 RAB30Q15771 203 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 DNAAF4Q8WXU2 420 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 UIMC1Q96RL1 719 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 PAGR1Q9BTK6 254 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 TMEM39AQ9NV64 488 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 IFT57Q9NWB7 429 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 MSRAQ9UJ68 235 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 SIPA1L1O43166 1804 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 ZNF236Q9UL36 1845 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 CDK5RAP2Q96SN8 1893 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 CACNA1BQ00975 2339 aa12.08□□□□□ -0.48
PTPN20-228ENST00000513266 TBC1D12O60347 775 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 PQBP1O60828 265 aaKnown RBP12.07□□□□□ -0.48
PTPN20-228ENST00000513266 FOXK2Q01167 660 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 FAAP100Q0VG06 881 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 MTMR2Q13614 643 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 VGLL2Q8N8G2 317 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 OSBPL5Q9H0X9 879 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-228ENST00000513266 KCNH6Q9H252 994 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 SLC28A3Q9HAS3 691 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 PHF24Q9UPV7 400 aa12.07□□□□□ -0.48
PTPN20-228ENST00000513266 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 USP17L5A8MUK1 530 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 SEPT4O43236 478 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 PTPREP23469 700 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 GNAI1P63096 354 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 RUNDC1Q96C34 613 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 STK31Q9BXU1 1019 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 CHMP4AQ9BY43 222 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 COG5Q9UP83 839 aa12.06□□□□□ -0.48
PTPN20-228ENST00000513266 ST18O60284 1047 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 CNMDO75829 334 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 TIMP1P01033 207 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 CAP2P40123 477 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 BACE1P56817 501 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 GRB14Q14449 540 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 FAM47AQ5JRC9 791 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 MFSD5Q6N075 450 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPN20-228ENST00000513266 CWC22Q9HCG8 908 aaKnown RBP12.05□□□□□ -0.48
PTPN20-228ENST00000513266 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 MTCH2Q9Y6C9 303 aa12.05□□□□□ -0.48
PTPN20-228ENST00000513266 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms