RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 OTUD5Q96G74 571 aa19.58■□□□□ 0.73
HMGCL-209ENST00000513148 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.72
HMGCL-209ENST00000513148 CAP2P40123 477 aa19.58■□□□□ 0.72
HMGCL-209ENST00000513148 PTH1RQ03431 593 aa19.58■□□□□ 0.72
HMGCL-209ENST00000513148 CTDSPL2Q05D32 466 aa19.58■□□□□ 0.72
HMGCL-209ENST00000513148 C16orf86Q6ZW13 317 aa19.58■□□□□ 0.72
HMGCL-209ENST00000513148 CCDC84Q86UT8 332 aaPredicted RBP19.58■□□□□ 0.72
HMGCL-209ENST00000513148 DSCC1Q9BVC3 393 aa19.58■□□□□ 0.72
HMGCL-209ENST00000513148 PICK1Q9NRD5 415 aa19.58■□□□□ 0.72
HMGCL-209ENST00000513148 ROBO3Q96MS0 1386 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 WDR33Q9C0J8 1336 aaKnown RBP19.57■□□□□ 0.72
HMGCL-209ENST00000513148 AOC2O75106 756 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 SLC10A3P09131 477 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 CDK8P49336 464 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 ALX1Q15699 326 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 CERKLQ49MI3 558 aaPredicted RBP19.57■□□□□ 0.72
HMGCL-209ENST00000513148 SWAP70Q9UH65 585 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 LAMA4Q16363 1823 aa19.57■□□□□ 0.72
HMGCL-209ENST00000513148 UNCXA6NJT0 531 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 FAM155AB1AL88 458 aaPredicted RBP19.56■□□□□ 0.72
HMGCL-209ENST00000513148 PRDM1O75626 825 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 ECE1P42892 770 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 JAG1P78504 1218 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 NOL9Q5SY16 702 aaKnown RBP19.56■□□□□ 0.72
HMGCL-209ENST00000513148 TATDN1Q6P1N9 297 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 CCDC102AQ96A19 550 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 ANO2Q9NQ90 1003 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 ZMYM6O95789 1325 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 KIAA1211Q6ZU35 1233 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 WNK4Q96J92 1243 aa19.56■□□□□ 0.72
HMGCL-209ENST00000513148 MPHOSPH10O00566 681 aaKnown RBP19.55■□□□□ 0.72
HMGCL-209ENST00000513148 GH2P01242 217 aa19.55■□□□□ 0.72
HMGCL-209ENST00000513148 GJA5P36382 358 aa19.55■□□□□ 0.72
HMGCL-209ENST00000513148 C8orf34Q49A92 452 aa19.55■□□□□ 0.72
HMGCL-209ENST00000513148 MKNK2Q9HBH9 465 aa19.55■□□□□ 0.72
HMGCL-209ENST00000513148 SPDYE5A6NIY4 337 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 SLC3A2P08195 630 aaKnown RBP19.54■□□□□ 0.72
HMGCL-209ENST00000513148 PTPRAP18433 802 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 ABCB5Q2M3G0 1257 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 SPRYD7Q5W111 196 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 ERO1BQ86YB8 467 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 DNAJC5GQ8N7S2 189 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 ZIC5Q96T25 663 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 INCENPQ9NQS7 918 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 ZBTB21Q9ULJ3 1066 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 PHIPQ8WWQ0 1821 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 ZHX2Q9Y6X8 837 aa19.54■□□□□ 0.72
HMGCL-209ENST00000513148 ZNF213O14771 459 aa19.53■□□□□ 0.72
HMGCL-209ENST00000513148 PDE4BQ07343 736 aa19.53■□□□□ 0.72
HMGCL-209ENST00000513148 RAB3GAP1Q15042 981 aa19.53■□□□□ 0.72
HMGCL-209ENST00000513148 ASNSP08243 561 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 AKR1B1P15121 316 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 NOGQ13253 232 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 LSG1Q9H089 658 aaKnown RBP19.52■□□□□ 0.72
HMGCL-209ENST00000513148 NBPF3Q9H094 633 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 CABP5Q9NP86 173 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 TOMM22Q9NS69 142 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 CTNNA3Q9UI47 895 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 IRF6O14896 467 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 ZBTB48P10074 688 aaPredicted RBP19.52■□□□□ 0.72
HMGCL-209ENST00000513148 RASA1P20936 1047 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 CLCN1P35523 988 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 PPATQ06203 517 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 IMMTQ16891 758 aaKnown RBP19.52■□□□□ 0.72
HMGCL-209ENST00000513148 TBC1D10CQ8IV04 446 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 ANAPC4Q9UJX5 808 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 TACC3Q9Y6A5 838 aa19.52■□□□□ 0.72
HMGCL-209ENST00000513148 ZNF287Q9HBT7 754 aa19.51■□□□□ 0.71
HMGCL-209ENST00000513148 RBM8AQ9Y5S9 174 aaKnown RBP19.51■□□□□ 0.71
HMGCL-209ENST00000513148 THSD7BQ9C0I4 1608 aa19.51■□□□□ 0.71
HMGCL-209ENST00000513148 TRIM75PA6NK02 468 aa19.51■□□□□ 0.71
HMGCL-209ENST00000513148 KIF23Q02241 960 aaPredicted RBP19.51■□□□□ 0.71
HMGCL-209ENST00000513148 PPIL2Q13356 520 aa19.51■□□□□ 0.71
HMGCL-209ENST00000513148 RRP12Q5JTH9 1297 aaKnown RBP19.51■□□□□ 0.71
HMGCL-209ENST00000513148 MAP4K1Q92918 833 aa19.51■□□□□ 0.71
HMGCL-209ENST00000513148 RRAGDQ9NQL2 400 aaPredicted RBP19.51■□□□□ 0.71
HMGCL-209ENST00000513148 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
HMGCL-209ENST00000513148 USP17L5A8MUK1 530 aa19.5■□□□□ 0.71
HMGCL-209ENST00000513148 SEPT2Q15019 361 aa19.5■□□□□ 0.71
HMGCL-209ENST00000513148 CLEC10AQ8IUN9 316 aa19.5■□□□□ 0.71
HMGCL-209ENST00000513148 ZNF444Q8N0Y2 327 aaPredicted RBP19.5■□□□□ 0.71
HMGCL-209ENST00000513148 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
HMGCL-209ENST00000513148 TAOK2Q9UL54 1235 aa19.5■□□□□ 0.71
HMGCL-209ENST00000513148 FAM47AQ5JRC9 791 aa19.49■□□□□ 0.71
HMGCL-209ENST00000513148 CCDC17Q96LX7 622 aa19.49■□□□□ 0.71
HMGCL-209ENST00000513148 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.49■□□□□ 0.71
HMGCL-209ENST00000513148 GUCY1A2P33402 732 aa19.49■□□□□ 0.71
HMGCL-209ENST00000513148 AKNAD1Q5T1N1 836 aa19.49■□□□□ 0.71
HMGCL-209ENST00000513148 MFSD6Q6ZSS7 791 aa19.49■□□□□ 0.71
HMGCL-209ENST00000513148 TMEM179Q6ZVK1 233 aa19.49■□□□□ 0.71
HMGCL-209ENST00000513148 NEDD4P46934 1319 aa19.48■□□□□ 0.71
HMGCL-209ENST00000513148 PTPRFP10586 1907 aa19.48■□□□□ 0.71
HMGCL-209ENST00000513148 RANBP6O60518 1105 aaKnown RBP19.48■□□□□ 0.71
HMGCL-209ENST00000513148 CYP21A2P08686 494 aa19.48■□□□□ 0.71
HMGCL-209ENST00000513148 SLC4A3P48751 1232 aa19.48■□□□□ 0.71
HMGCL-209ENST00000513148 SPP2Q13103 211 aa19.48■□□□□ 0.71
HMGCL-209ENST00000513148 AFG3L2Q9Y4W6 797 aa19.48■□□□□ 0.71
HMGCL-209ENST00000513148 TSPY3P0CV98 308 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 TSPY8P0CW00 308 aa19.47■□□□□ 0.71
HMGCL-209ENST00000513148 ZNF280CQ8ND82 737 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms