RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 FERMT2Q96AC1 680 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 ZNF521Q96K83 1311 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 ZFHX4Q86UP3 3567 aa11.99□□□□□ -0.49
CLCN3-208ENST00000512813 ATRXP46100 2492 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 NEURL1BA8MQ27 555 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PEX10O60683 326 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PQBP1O60828 265 aaKnown RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 RGS20O76081 388 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 IGHA2P01877 340 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 ERVK-9P63128 1117 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 ERVK-24P63145 666 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 IRX3P78415 501 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 CHAF1AQ13111 956 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 UBE4AQ14139 1066 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 LRRC41Q15345 812 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PPP2R2DQ66LE6 453 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 MFSD5Q6N075 450 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 CDC42EP5Q6NZY7 148 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PSRC1Q6PGN9 363 aaPredicted RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 FAM178BQ8IXR5 827 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PRSS33Q8NF86 280 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 EDC3Q96F86 508 aaKnown RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 PHF24Q9UPV7 400 aa11.98□□□□□ -0.49
CLCN3-208ENST00000512813 RIF1Q5UIP0 2472 aaKnown RBP11.98□□□□□ -0.49
CLCN3-208ENST00000512813 TRIOO75962 3097 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 DCXO43602 365 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 TIMP1P01033 207 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 HOXC6P09630 235 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 CYP2C19P33261 490 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 CASP7P55210 303 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 HERVK_113P62684 666 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 FAAP100Q0VG06 881 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 NEXNQ0ZGT2 675 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 SPP2Q13103 211 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 CWF19L2Q2TBE0 894 aaKnown RBP11.97□□□□□ -0.49
CLCN3-208ENST00000512813 SH3D19Q5HYK7 790 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 HFE2Q6ZVN8 426 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
CLCN3-208ENST00000512813 ZNF280CQ8ND82 737 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 ANKS1AQ92625 1134 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 MFSD14AQ96MC6 490 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 RBPJLQ9UBG7 517 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 NCOR2Q9Y618 2525 aa11.97□□□□□ -0.49
CLCN3-208ENST00000512813 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 PLIN1O60240 522 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 SLC5A1P13866 664 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 HOXA7P31268 230 aaPredicted RBP11.96□□□□□ -0.49
CLCN3-208ENST00000512813 ATP2B2Q01814 1243 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 IFIT5Q13325 482 aaKnown RBP11.96□□□□□ -0.49
CLCN3-208ENST00000512813 POTEBQ6S5H4 581 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 ANKRD33Q7Z3H0 272 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 TOX2Q96NM4 488 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 TBX21Q9UL17 535 aa11.96□□□□□ -0.49
CLCN3-208ENST00000512813 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.49
CLCN3-208ENST00000512813 TPRP12270 2363 aaKnown RBP11.96□□□□□ -0.5
CLCN3-208ENST00000512813 SEPT4O43236 478 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 GLRX3O76003 335 aaKnown RBP11.95□□□□□ -0.5
CLCN3-208ENST00000512813 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-208ENST00000512813 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
CLCN3-208ENST00000512813 GCKRQ14397 625 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 Q3C1V9 767 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 FBXO33Q7Z6M2 555 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 GVINP1Q7Z2Y8 2422 aa11.95□□□□□ -0.5
CLCN3-208ENST00000512813 FAM186AA6NE01 2351 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 RFX7Q2KHR2 1363 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 SLC15A5A6NIM6 579 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 DCDC2CA8MYV0 355 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 ENTPD3O75355 529 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 KSR2Q6VAB6 950 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 GTF3C2Q8WUA4 911 aaPredicted RBP11.94□□□□□ -0.5
CLCN3-208ENST00000512813 MTIF3Q9H2K0 278 aaKnown RBP11.94□□□□□ -0.5
CLCN3-208ENST00000512813 CWC22Q9HCG8 908 aaKnown RBP11.94□□□□□ -0.5
CLCN3-208ENST00000512813 ATAD5Q96QE3 1844 aa11.94□□□□□ -0.5
CLCN3-208ENST00000512813 PI4KAP2A4QPH2 592 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 FRAT2O75474 233 aaPredicted RBP11.93□□□□□ -0.5
CLCN3-208ENST00000512813 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 CSF2RAP15509 400 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 PTPREP23469 700 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 FAM47AQ5JRC9 791 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 KRT40Q6A162 431 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 LDHAL6AQ6ZMR3 332 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 SH3BP5LQ7L8J4 393 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 VPS37DQ86XT2 251 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 PI4KAP1Q8N8J0 262 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 PRRX2Q99811 253 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLCN3-208ENST00000512813 CNNM1Q9NRU3 951 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CLCN3-208ENST00000512813 PCDHA11Q9Y5I1 949 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 ACACBO00763 2458 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 ZNF236Q9UL36 1845 aa11.93□□□□□ -0.5
CLCN3-208ENST00000512813 GAKO14976 1311 aa11.92□□□□□ -0.5
CLCN3-208ENST00000512813 A0A1W2PQ45 241 aaPredicted RBP11.92□□□□□ -0.5
CLCN3-208ENST00000512813 A0A1W2PQY0 241 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms