RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 MAP4K4O95819 1239 aaPredicted RBP19.68■□□□□ 0.74
DDR1-269ENST00000512725 ASNSP08243 561 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 CNGA1P29973 690 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 ERVK-9P63128 1117 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 ERVK-24P63145 666 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 Q3C1V9 767 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 GPR142Q7Z601 462 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 PLEKHH3Q7Z736 793 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 SPATA5Q8NB90 893 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 WDR18Q9BV38 432 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 PORCNQ9H237 461 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 PI4KBQ9UBF8 816 aa19.68■□□□□ 0.74
DDR1-269ENST00000512725 USP17L10C9JJH3 530 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 COL6A1P12109 1028 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
DDR1-269ENST00000512725 ATN1P54259 1190 aaPredicted RBP19.67■□□□□ 0.74
DDR1-269ENST00000512725 ALDH1L2Q3SY69 923 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 GUCD1Q96NT3 240 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 RBPJLQ9UBG7 517 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 PRKAG2Q9UGJ0 569 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 NDUFB9Q9Y6M9 179 aa19.67■□□□□ 0.74
DDR1-269ENST00000512725 C19orf81C9J6K1 198 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 SRGAP3O43295 1099 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 SHROOM1Q2M3G4 852 aaPredicted RBP19.66■□□□□ 0.74
DDR1-269ENST00000512725 ZNF697Q5TEC3 545 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 LHX8Q68G74 356 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 MAPKAPK5Q8IW41 473 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 TGFBRAP1Q8WUH2 860 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 MEIS3Q99687 375 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 APBA2Q99767 749 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 AATFQ9NY61 560 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDR1-269ENST00000512725 NOB1Q9ULX3 412 aaKnown RBP19.66■□□□□ 0.74
DDR1-269ENST00000512725 ZNF521Q96K83 1311 aa19.66■□□□□ 0.74
DDR1-269ENST00000512725 COL2A1P02458 1487 aaPredicted RBP19.66■□□□□ 0.74
DDR1-269ENST00000512725 ZBTB22O15209 634 aa19.65■□□□□ 0.74
DDR1-269ENST00000512725 ZYXQ15942 572 aaKnown RBP19.65■□□□□ 0.74
DDR1-269ENST00000512725 MFSD14CQ5VZR4 134 aa19.65■□□□□ 0.74
DDR1-269ENST00000512725 DHX36Q9H2U1 1008 aaKnown RBP19.65■□□□□ 0.74
DDR1-269ENST00000512725 BAG3O95817 575 aa19.64■□□□□ 0.73
DDR1-269ENST00000512725 JAG1P78504 1218 aa19.64■□□□□ 0.73
DDR1-269ENST00000512725 MORN1Q5T089 497 aa19.64■□□□□ 0.73
DDR1-269ENST00000512725 EDC3Q96F86 508 aaKnown RBP19.64■□□□□ 0.73
DDR1-269ENST00000512725 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
DDR1-269ENST00000512725 DNAH12Q6ZR08 3092 aa19.64■□□□□ 0.73
DDR1-269ENST00000512725 LAMA2P24043 3122 aaKnown RBP19.64■□□□□ 0.73
DDR1-269ENST00000512725 POTEB2H3BUK9 544 aa19.63■□□□□ 0.73
DDR1-269ENST00000512725 FAM109BQ6ICB4 259 aaPredicted RBP19.63■□□□□ 0.73
DDR1-269ENST00000512725 NAA16Q6N069 864 aaPredicted RBP19.63■□□□□ 0.73
DDR1-269ENST00000512725 GTF3C2Q8WUA4 911 aaPredicted RBP19.63■□□□□ 0.73
DDR1-269ENST00000512725 USP6NLQ92738 828 aa19.63■□□□□ 0.73
DDR1-269ENST00000512725 SNRKQ9NRH2 765 aa19.63■□□□□ 0.73
DDR1-269ENST00000512725 PALD1Q9ULE6 856 aa19.63■□□□□ 0.73
DDR1-269ENST00000512725 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.63■□□□□ 0.73
DDR1-269ENST00000512725 GLRX3O76003 335 aaKnown RBP19.62■□□□□ 0.73
DDR1-269ENST00000512725 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
DDR1-269ENST00000512725 ATP2B2Q01814 1243 aa19.62■□□□□ 0.73
DDR1-269ENST00000512725 MAP2K5Q13163 448 aa19.62■□□□□ 0.73
DDR1-269ENST00000512725 USP17L2Q6R6M4 530 aa19.62■□□□□ 0.73
DDR1-269ENST00000512725 FEZ1Q99689 392 aa19.62■□□□□ 0.73
DDR1-269ENST00000512725 API5Q9BZZ5 524 aaKnown RBP19.62■□□□□ 0.73
DDR1-269ENST00000512725 ZBTB21Q9ULJ3 1066 aa19.62■□□□□ 0.73
DDR1-269ENST00000512725 ATP11BQ9Y2G3 1177 aa19.62■□□□□ 0.73
DDR1-269ENST00000512725 PLCG2P16885 1265 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 MCAMP43121 646 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 CCNA1P78396 465 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 SLFN5Q08AF3 891 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 FOXP4Q8IVH2 680 aaPredicted RBP19.61■□□□□ 0.73
DDR1-269ENST00000512725 DNAJC18Q9H819 358 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 EMILIN3Q9NT22 766 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 IVNS1ABPQ9Y6Y0 642 aa19.61■□□□□ 0.73
DDR1-269ENST00000512725 FLT1P17948 1338 aa19.6■□□□□ 0.73
DDR1-269ENST00000512725 HLA-DOAP06340 250 aa19.6■□□□□ 0.73
DDR1-269ENST00000512725 UQCRFS1P1P0C7P4 283 aa19.6■□□□□ 0.73
DDR1-269ENST00000512725 ARID4AP29374 1257 aaPredicted RBP19.6■□□□□ 0.73
DDR1-269ENST00000512725 RTP1P59025 263 aa19.6■□□□□ 0.73
DDR1-269ENST00000512725 G3BP1Q13283 466 aaKnown RBP eCLIP19.6■□□□□ 0.73
DDR1-269ENST00000512725 PRDM5Q9NQX1 630 aaPredicted RBP19.6■□□□□ 0.73
DDR1-269ENST00000512725 FLRT1Q9NZU1 646 aa19.6■□□□□ 0.73
DDR1-269ENST00000512725 DDX20Q9UHI6 824 aaKnown RBP19.6■□□□□ 0.73
DDR1-269ENST00000512725 SIPA1L1O43166 1804 aa19.6■□□□□ 0.73
DDR1-269ENST00000512725 EYSQ5T1H1 3165 aa19.59■□□□□ 0.73
DDR1-269ENST00000512725 TTC39AQ5SRH9 613 aa19.59■□□□□ 0.73
DDR1-269ENST00000512725 MAFAQ8NHW3 353 aaPredicted RBP19.59■□□□□ 0.73
DDR1-269ENST00000512725 CDCA7LQ96GN5 454 aa19.59■□□□□ 0.73
DDR1-269ENST00000512725 CDX2Q99626 313 aaPredicted RBP19.59■□□□□ 0.73
DDR1-269ENST00000512725 RABGAP1Q9Y3P9 1069 aa19.59■□□□□ 0.73
DDR1-269ENST00000512725 FRMPD3Q5JV73 1810 aa19.59■□□□□ 0.73
DDR1-269ENST00000512725 USP17L15C9J2P7 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L13C9JLJ4 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L11C9JVI0 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L18D6R9N7 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L22D6RA61 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L17D6RBQ6 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L19D6RCP7 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L20D6RJB6 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 GH2P01242 217 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 GNAI3P08754 354 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 CYP2C19P33261 490 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 USP17L24Q0WX57 530 aa19.58■□□□□ 0.72
DDR1-269ENST00000512725 GJC2Q5T442 439 aaPredicted RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms