RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
USP46-208ENST00000512656 UBE4AQ14139 1066 aa9.04□□□□□ -0.96
USP46-208ENST00000512656 PKN2Q16513 984 aaKnown RBP9.04□□□□□ -0.96
USP46-208ENST00000512656 SUPT20HL1Q3ZLR7 823 aa9.04□□□□□ -0.96
USP46-208ENST00000512656 MOB2Q70IA6 237 aa9.04□□□□□ -0.96
USP46-208ENST00000512656 FAM117AQ9C073 453 aa9.04□□□□□ -0.96
USP46-208ENST00000512656 DEFB129Q9H1M3 183 aa9.04□□□□□ -0.96
USP46-208ENST00000512656 IRS2Q9Y4H2 1338 aa9.04□□□□□ -0.96
USP46-208ENST00000512656 AKAP11Q9UKA4 1901 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 PDE4DIPQ5VU43 2346 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 SNAP23O00161 211 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 HIBADHP31937 336 aaKnown RBP9.03□□□□□ -0.96
USP46-208ENST00000512656 RBM5P52756 815 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP46-208ENST00000512656 INHBEP58166 350 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 PTPN12Q05209 780 aaKnown RBP9.03□□□□□ -0.96
USP46-208ENST00000512656 PRKG1Q13976 671 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 CFAP100Q494V2 611 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
USP46-208ENST00000512656 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 LDLRAD1Q5T700 205 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 CERS5Q8N5B7 392 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 SLC10A4Q96EP9 437 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 ZNF594Q96JF6 807 aaPredicted RBP9.03□□□□□ -0.96
USP46-208ENST00000512656 ANGEL1Q9UNK9 670 aaKnown RBP9.03□□□□□ -0.96
USP46-208ENST00000512656 FAM205AQ6ZU69 1335 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 MROH5Q6ZUA9 1318 aa9.03□□□□□ -0.96
USP46-208ENST00000512656 F8W031 263 aaPredicted RBP9.02□□□□□ -0.97
USP46-208ENST00000512656 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.97
USP46-208ENST00000512656 NR3C2P08235 984 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 TNFAIP1Q13829 316 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 MAP3K11Q16584 847 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 VPS37DQ86XT2 251 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 VEZTQ9HBM0 779 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 FKBPLQ9UIM3 349 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 CDV3Q9UKY7 258 aaKnown RBP9.02□□□□□ -0.97
USP46-208ENST00000512656 PTPRCP08575 1304 aa9.02□□□□□ -0.97
USP46-208ENST00000512656 CLRN2A0PK11 232 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 MANSC4A6NHS7 340 aaPredicted RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 E9PSI1 815 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 GPR25O00155 361 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 TBC1D8O95759 1140 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 ZBTB48P10074 688 aaPredicted RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 IREB2P48200 963 aaKnown RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 CAVIN4Q5BKX8 364 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 MFSD14BQ5SR56 506 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 VASH1Q7L8A9 365 aaPredicted RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 TDRD7Q8NHU6 1098 aaKnown RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 ZNF296Q8WUU4 475 aaPredicted RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 SUCLG2Q96I99 432 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
USP46-208ENST00000512656 CFHR5Q9BXR6 569 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 GOPCQ9HD26 462 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 SERPINA10Q9UK55 444 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 GPSM3Q9Y4H4 160 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 UTYO14607 1347 aa9.01□□□□□ -0.97
USP46-208ENST00000512656 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
USP46-208ENST00000512656 FKTNO75072 461 aa9□□□□□ -0.97
USP46-208ENST00000512656 FRAT2O75474 233 aaPredicted RBP9□□□□□ -0.97
USP46-208ENST00000512656 NBPF7P0C2Y1 421 aaPredicted RBP9□□□□□ -0.97
USP46-208ENST00000512656 GYG1P46976 350 aa9□□□□□ -0.97
USP46-208ENST00000512656 TNNI2P48788 182 aa9□□□□□ -0.97
USP46-208ENST00000512656 METTL24Q5JXM2 366 aa9□□□□□ -0.97
USP46-208ENST00000512656 OTUD7BQ6GQQ9 843 aa9□□□□□ -0.97
USP46-208ENST00000512656 PROCA1Q8NCQ7 364 aaPredicted RBP9□□□□□ -0.97
USP46-208ENST00000512656 TBC1D22AQ8WUA7 517 aa9□□□□□ -0.97
USP46-208ENST00000512656 FAM84BQ96KN1 310 aaPredicted RBP9□□□□□ -0.97
USP46-208ENST00000512656 BICC1Q9H694 974 aaKnown RBP9□□□□□ -0.97
USP46-208ENST00000512656 TTF2Q9UNY4 1162 aaKnown RBP9□□□□□ -0.97
USP46-208ENST00000512656 JAG2Q9Y219 1238 aa9□□□□□ -0.97
USP46-208ENST00000512656 RIPOR2Q9Y4F9 1068 aa9□□□□□ -0.97
USP46-208ENST00000512656 ZNF521Q96K83 1311 aa9□□□□□ -0.97
USP46-208ENST00000512656 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
USP46-208ENST00000512656 ZNF646O15015 1829 aaPredicted RBP8.99□□□□□ -0.97
USP46-208ENST00000512656 FSHRP23945 695 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 RASA3Q14644 834 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 RABL6Q3YEC7 729 aaPredicted RBP8.99□□□□□ -0.97
USP46-208ENST00000512656 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 ANKRD13AQ8IZ07 590 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 PNMA1Q8ND90 353 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 WNK4Q96J92 1243 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 PURBQ96QR8 312 aaKnown RBP8.99□□□□□ -0.97
USP46-208ENST00000512656 PUS3Q9BZE2 481 aaKnown RBP8.99□□□□□ -0.97
USP46-208ENST00000512656 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 ZNF70Q9UC06 446 aaPredicted RBP8.99□□□□□ -0.97
USP46-208ENST00000512656 STK17AQ9UEE5 414 aa8.99□□□□□ -0.97
USP46-208ENST00000512656 H3BM21 787 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 UPP2O95045 317 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 PDE8BO95263 885 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 CRKP46108 304 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 SOX10P56693 466 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 HDLBPQ00341 1268 aaKnown RBP8.98□□□□□ -0.97
USP46-208ENST00000512656 NBPF12Q5TAG4 269 aaPredicted RBP8.98□□□□□ -0.97
USP46-208ENST00000512656 FBXO46Q6PJ61 603 aaPredicted RBP8.98□□□□□ -0.97
USP46-208ENST00000512656 FBXO33Q7Z6M2 555 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 CCDC116Q8IYX3 515 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 DZIP1LQ8IYY4 767 aaKnown RBP8.98□□□□□ -0.97
USP46-208ENST00000512656 MEIOBQ8N635 442 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
USP46-208ENST00000512656 SSH1Q8WYL5 1049 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms