RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 OSBP2Q969R2 916 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 MCOLN1Q9GZU1 580 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 ZCCHC17Q9NP64 241 aaKnown RBP8.9□□□□□ -0.98
NR1I3-231ENST00000512340 TMOD4Q9NZQ9 345 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 ZHX2Q9Y6X8 837 aa8.9□□□□□ -0.98
NR1I3-231ENST00000512340 MYH1P12882 1939 aa8.9□□□□□ -0.99
NR1I3-231ENST00000512340 RAD50Q92878 1312 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 CCL15-CCL14A0A0B4J2E2 113 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 PHF20L1A8MW92 1017 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 MINDY4BA8MYZ0 360 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 C19orf81C9J6K1 198 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 MPHOSPH10O00566 681 aaKnown RBP8.89□□□□□ -0.99
NR1I3-231ENST00000512340 PTPRAP18433 802 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 USP14P54578 494 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 CCL15Q16663 113 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 C12orf60Q5U649 245 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 CDAN1Q8IWY9 1227 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 ZNF444Q8N0Y2 327 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-231ENST00000512340 FEZ1Q99689 392 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 ZFYVE28Q9HCC9 887 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 PNMA3Q9UL41 463 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 SNCAIPQ9Y6H5 919 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 SSC5DA1L4H1 1573 aa8.89□□□□□ -0.99
NR1I3-231ENST00000512340 CCDC171Q6TFL3 1326 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 GSG1L2A8MUP6 293 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 TRPA1O75762 1119 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 PCP11498 1178 aaKnown RBP8.88□□□□□ -0.99
NR1I3-231ENST00000512340 NMIQ13287 307 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-231ENST00000512340 RAB3GAP1Q15042 981 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 TATDN1Q6P1N9 297 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 CTR9Q6PD62 1173 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 CWC27Q6UX04 472 aaKnown RBP8.88□□□□□ -0.99
NR1I3-231ENST00000512340 TMEM179Q6ZVK1 233 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 IFNL1Q8IU54 200 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 IFNL3Q8IZI9 196 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 ZNF280CQ8ND82 737 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 WDR18Q9BV38 432 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 RNF41Q9H4P4 317 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-231ENST00000512340 ARHGEF10LQ9HCE6 1279 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 FZD1Q9UP38 647 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
NR1I3-231ENST00000512340 FOCADQ5VW36 1801 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 TRIM75PA6NK02 468 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 M0R2C6 588 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 IRF6O14896 467 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 PRKAB2O43741 272 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 GH2P01242 217 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 PDE4AP27815 886 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 PLCD1P51178 756 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 DGKZQ13574 1117 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 KIF22Q14807 665 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 TAF1CQ15572 869 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-231ENST00000512340 ALX1Q15699 326 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 SLC4A8Q2Y0W8 1093 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 BMP2KLQ5H9B9 411 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 PRPF38BQ5VTL8 546 aaKnown RBP8.87□□□□□ -0.99
NR1I3-231ENST00000512340 GADL1Q6ZQY3 521 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 C16orf86Q6ZW13 317 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 PROCA1Q8NCQ7 364 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-231ENST00000512340 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-231ENST00000512340 PARK7Q99497 189 aaKnown RBP8.87□□□□□ -0.99
NR1I3-231ENST00000512340 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 ZBTB21Q9ULJ3 1066 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 SLC45A1Q9Y2W3 748 aa8.87□□□□□ -0.99
NR1I3-231ENST00000512340 ZMYM6O95789 1325 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 NAV1Q8NEY1 1877 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 TESPA1A2RU30 521 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-231ENST00000512340 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 ZNF213O14771 459 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 GDF11O95390 407 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 PDIA4P13667 645 aaKnown RBP8.86□□□□□ -0.99
NR1I3-231ENST00000512340 OSBPP22059 807 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 CDK8P49336 464 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 BACE1P56817 501 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 GABPAQ06546 454 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 PPARAQ07869 468 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 TRDNQ13061 729 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 SPP2Q13103 211 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 IMMTQ16891 758 aaKnown RBP8.86□□□□□ -0.99
NR1I3-231ENST00000512340 CCDC178Q5BJE1 867 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 NOM1Q5C9Z4 860 aaKnown RBP8.86□□□□□ -0.99
NR1I3-231ENST00000512340 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 ANKRD23Q86SG2 305 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 FAM227BQ96M60 508 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 DSCC1Q9BVC3 393 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 TOMM22Q9NS69 142 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 RNF186Q9NXI6 227 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 AFG3L2Q9Y4W6 797 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 TNRC18O15417 2968 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-231ENST00000512340 CASP8AP2Q9UKL3 1982 aa8.86□□□□□ -0.99
NR1I3-231ENST00000512340 A0A0D9SFI3 127 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 A0A0G2JLL6 359 aaPredicted RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 TSPY3P0CV98 308 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 TSPY8P0CW00 308 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 HSPD1P10809 573 aaKnown RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 SHMT1P34896 483 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 IRX3P78415 501 aaPredicted RBP8.85□□□□□ -0.99
NR1I3-231ENST00000512340 ICA1Q05084 483 aa8.85□□□□□ -0.99
NR1I3-231ENST00000512340 PKN2Q16513 984 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms