RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 NIM1KQ8IY84 436 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 REXO1Q8N1G1 1221 aaKnown RBP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 CPDO75976 1380 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 PPEF1O14829 653 aaPredicted RBP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 MLKLQ8NB16 471 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 GJD4Q96KN9 370 aaPredicted RBP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 ARHGAP23Q9P227 1491 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 SLIT1O75093 1534 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 CEP135Q66GS9 1140 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 SV2BQ7L1I2 683 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 PDCL2Q8N4E4 241 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 MARCH10Q8NA82 808 aaPredicted RBP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 CELF1Q92879 486 aaKnown RBP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 ARHGEF1Q92888 912 aaKnown RBP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 RIPOR2Q9Y4F9 1068 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 DDAH1O94760 285 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 TBC1D9BQ66K14 1250 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 ITSN1Q15811 1721 aa14.81□□□□□ -0.04
PCDHA4-202ENST00000512229 SCG2P13521 617 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 RDXP35241 583 aaKnown RBP14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 LIFRP42702 1097 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 ADCY7P51828 1080 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 PRIMPOLQ96LW4 560 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 PLA2G12BQ9BX93 195 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 PCDHA7Q9UN72 937 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 TNNT3P45378 269 aaPredicted RBP14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 ZYXQ15942 572 aaKnown RBP14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 SPAG5Q96R06 1193 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 PAXBP1Q9Y5B6 917 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 JCADQ9P266 1359 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 SMCO2A6NFE2 343 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 CHMP4BP1P59074 171 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 SPATA31A1Q5TZJ5 1347 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 KIAA1468Q9P260 1216 aa14.8□□□□□ -0.04
PCDHA4-202ENST00000512229 CARMIL3Q8ND23 1372 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 PFKFB1P16118 471 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 ADRA2BP18089 450 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 CMA1P23946 247 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 RNF26Q9BY78 433 aaPredicted RBP14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 TMX1Q9H3N1 280 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 DCCP43146 1447 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 USP42Q9H9J4 1324 aaKnown RBP14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 MECOMQ03112 1051 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 POSTNQ15063 836 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 GAS2L3Q86XJ1 694 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 BLIDQ8IZY5 108 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 SCLT1Q96NL6 688 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 KIF2CQ99661 725 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 LRWD1Q9UFC0 647 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 PXDNLA1KZ92 1463 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 NLRP12P59046 1061 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 DIXDC1Q155Q3 683 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 MMRN2Q9H8L6 949 aa14.79□□□□□ -0.04
PCDHA4-202ENST00000512229 SH2B2O14492 632 aaPredicted RBP14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 ERLIN2O94905 339 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 POTEJP0CG39 1038 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 IFNAR1P17181 557 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 NF2P35240 595 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 PLS1Q14651 629 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 RTEL1Q9NZ71 1219 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 PAFAH1B1P43034 410 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 SCARF1Q14162 830 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 VPS72Q15906 364 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 RFX7Q2KHR2 1363 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 UTYO14607 1347 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 MMP10P09238 476 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 CYLC1P35663 651 aaPredicted RBP14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 MAPK8IP1Q9UQF2 711 aa14.78□□□□□ -0.04
PCDHA4-202ENST00000512229 PPP1R2P41236 205 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 TMCO3Q6UWJ1 677 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 STAMQ92783 540 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 MST1RQ04912 1400 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 CYP2D7A0A087X1C5 515 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 CCT6AP40227 531 aaKnown RBP14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 USP8P40818 1118 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 UBXN1Q04323 297 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 PDE4DQ08499 809 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 TOB2Q14106 344 aaPredicted RBP14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 HS2ST1Q7LGA3 356 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 ZNF34Q8IZ26 560 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 NFE2L3Q9Y4A8 694 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 CLIC4Q9Y696 253 aa14.77□□□□□ -0.04
PCDHA4-202ENST00000512229 CSF1RP07333 972 aa14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 AXDND1Q5T1B0 1012 aaPredicted RBP14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 CCDC65Q8IXS2 484 aa14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 TTC14Q96N46 770 aa14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 DNAI1Q9UI46 699 aa14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 EIF3JO75822 258 aaKnown RBP14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 CERKLQ49MI3 558 aaPredicted RBP14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 RCOR1Q9UKL0 485 aa14.77□□□□□ -0.05
PCDHA4-202ENST00000512229 PRDX5P30044 214 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 FANCCQ00597 558 aa14.76□□□□□ -0.05
PCDHA4-202ENST00000512229 SLC39A14Q15043 492 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms