RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 NEDD1Q8NHV4 660 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 INTS4Q96HW7 963 aaKnown RBP11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 IL17RBQ9NRM6 502 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 ADARB2Q9NS39 739 aaKnown RBP11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 TOMM22Q9NS69 142 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 HACL1Q9UJ83 578 aa11.75□□□□□ -0.53
PDGFRA-209ENST00000512143 IGKV6D-41A0A0C4DH26 115 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 IFIT3O14879 490 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 TBC1D12O60347 775 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 PFKFB2O60825 505 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 RASA3Q14644 834 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 TMEM67Q5HYA8 995 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 NOL8Q76FK4 1167 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 ZNF444Q8N0Y2 327 aaPredicted RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 TMTC2Q8N394 836 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 ENAHQ8N8S7 591 aaPredicted RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 ZSCAN10Q96SZ4 725 aaPredicted RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 ZKSCAN3Q9BRR0 538 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 VEZTQ9HBM0 779 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 HERC5Q9UII4 1024 aaKnown RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 PLIN4Q96Q06 1357 aa11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
PDGFRA-209ENST00000512143 DCAF8L1A6NGE4 600 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 TSPY2A6NKD2 308 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 POTECB2RU33 542 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 NMT2O60551 498 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 TNKSO95271 1327 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 LMOD1P29536 600 aaPredicted RBP11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 TNNI2P48788 182 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 FGD1P98174 961 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 TNFAIP1Q13829 316 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 SART3Q15020 963 aaKnown RBP11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 GTF3C6Q969F1 213 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 CSRNP1Q96S65 589 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 UBAC1Q9BSL1 405 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
PDGFRA-209ENST00000512143 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 SCN4AP35499 1836 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 NID2Q14112 1375 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 KLF18A0A0U1RQI7 1052 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 TSPY3P0CV98 308 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 TSPY8P0CW00 308 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 AKR1B1P15121 316 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 RCAN1P53805 252 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 SCRN1Q12765 414 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 WTAPQ15007 396 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 CCDC178Q5BJE1 867 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 ANGEL2Q5VTE6 544 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 ZSCAN29Q8IWY8 852 aaPredicted RBP11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 NECAB1Q8N987 351 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 CCDC17Q96LX7 622 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 DEFB129Q9H1M3 183 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 MYH8P13535 1937 aa11.72□□□□□ -0.53
PDGFRA-209ENST00000512143 ERICH2A1L162 156 aa11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 CTDNEP1O95476 244 aa11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 USP50Q70EL3 339 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 CRACR2BQ8N4Y2 399 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 ZC3H15Q8WU90 426 aaKnown RBP11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 SLKQ9H2G2 1235 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 CWC22Q9HCG8 908 aaKnown RBP11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 FAM217BQ9NTX9 383 aaPredicted RBP11.71□□□□□ -0.53
PDGFRA-209ENST00000512143 FAM196BA6NMK8 535 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 EPHX2P34913 555 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 JAG1P78504 1218 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 TROAPQ12815 778 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 STK3Q13188 491 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 CERKLQ49MI3 558 aaPredicted RBP11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 ZNF654Q8IZM8 581 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 SMARCC2Q8TAQ2 1214 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 CEP95Q96GE4 821 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 LLPHQ9BRT6 129 aaKnown RBP11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 MTMR4Q9NYA4 1195 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 GGA3Q9NZ52 723 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 SCAF8Q9UPN6 1271 aaKnown RBP11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 PPP2R3BQ9Y5P8 575 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
PDGFRA-209ENST00000512143 IQCA1LA6NCM1 817 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms