RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CBX7O95931 251 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 PF4P02776 101 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 PLCG1P19174 1290 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 CAMK2GQ13555 558 aaPredicted RBP5.37□□□□□ -1.55
CHD1-207ENST00000511628 SLBPQ14493 270 aaKnown RBP eCLIP5.37□□□□□ -1.55
CHD1-207ENST00000511628 NKG7Q16617 165 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 CDKAL1Q5VV42 579 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 HEXIM2Q96MH2 286 aaKnown RBP5.37□□□□□ -1.55
CHD1-207ENST00000511628 TMEM74Q96NL1 305 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 DPH2Q9BQC3 489 aaPredicted RBP5.37□□□□□ -1.55
CHD1-207ENST00000511628 ADGRE2Q9UHX3 823 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 MAPK8IP1Q9UQF2 711 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 SNX11Q9Y5W9 270 aa5.37□□□□□ -1.55
CHD1-207ENST00000511628 SLITRK5O94991 958 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 CST3P01034 146 aaPredicted RBP5.36□□□□□ -1.55
CHD1-207ENST00000511628 CD8BP10966 210 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 ZNF16P17020 682 aaPredicted RBP5.36□□□□□ -1.55
CHD1-207ENST00000511628 CD96P40200 585 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 ETV3P41162 512 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 TNNI2P48788 182 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 YARSP54577 528 aaKnown RBP5.36□□□□□ -1.55
CHD1-207ENST00000511628 LMNB2Q03252 620 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 FAM160A1Q05DH4 1040 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 MLECQ14165 292 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 BNC2Q6ZN30 1099 aaPredicted RBP5.36□□□□□ -1.55
CHD1-207ENST00000511628 SPRED2Q7Z698 418 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 CCDC84Q86UT8 332 aaPredicted RBP5.36□□□□□ -1.55
CHD1-207ENST00000511628 MFSD4AQ8N468 514 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 TMEM87BQ96K49 555 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 RC3H2Q9HBD1 1191 aaKnown RBP5.36□□□□□ -1.55
CHD1-207ENST00000511628 RNF114Q9Y508 228 aa5.36□□□□□ -1.55
CHD1-207ENST00000511628 GFRA2O00451 464 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 EOMESO95936 686 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 CAP2P40123 477 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 TXKP42681 527 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 CLCN7P51798 805 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 ZNF792Q3KQV3 632 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 SLC6A19Q695T7 634 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 CDH24Q86UP0 819 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 GOLM1Q8NBJ4 401 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 FAM13CQ8NE31 585 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 GATAD2BQ8WXI9 593 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 ASIC4Q96FT7 647 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 RSRP1Q9BUV0 290 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 TJP2Q9UDY2 1190 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 GGT7Q9UJ14 662 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 PLAGL2Q9UPG8 496 aa5.35□□□□□ -1.55
CHD1-207ENST00000511628 F13A1P00488 732 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 FUT4P22083 530 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 RANGAP1P46060 587 aaPredicted RBP5.34□□□□□ -1.55
CHD1-207ENST00000511628 ZP2Q05996 745 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 HS2ST1Q7LGA3 356 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 MRPL41Q8IXM3 137 aaKnown RBP5.34□□□□□ -1.55
CHD1-207ENST00000511628 COX4I2Q96KJ9 171 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 KBTBD4Q9NVX7 518 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 KIAA1522Q9P206 1035 aaPredicted RBP5.34□□□□□ -1.55
CHD1-207ENST00000511628 KLHL3Q9UH77 587 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 ADAM30Q9UKF2 790 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 U3KQE9 123 aa5.34□□□□□ -1.55
CHD1-207ENST00000511628 H3BS24 57 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 TLR3O15455 904 aaKnown RBP5.33□□□□□ -1.56
CHD1-207ENST00000511628 GRIN3BO60391 1043 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 CILPO75339 1184 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 JUNBP17275 347 aaPredicted RBP5.33□□□□□ -1.56
CHD1-207ENST00000511628 CWF19L2Q2TBE0 894 aaKnown RBP5.33□□□□□ -1.56
CHD1-207ENST00000511628 MCATQ8IVS2 390 aaKnown RBP5.33□□□□□ -1.56
CHD1-207ENST00000511628 SPACA3Q8IXA5 215 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 TMEM87AQ8NBN3 555 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 TNKS2Q9H2K2 1166 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 CORINQ9Y5Q5 1042 aa5.33□□□□□ -1.56
CHD1-207ENST00000511628 KIR3DL1P43629 444 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 NKPD1Q17RQ9 610 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 SLC23A3Q6PIS1 610 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 NFXL1Q6ZNB6 911 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 FAM214BQ7L5A3 538 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 PHACTR4Q8IZ21 702 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 RIN3Q8TB24 985 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 ACSF2Q96CM8 615 aaPredicted RBP5.32□□□□□ -1.56
CHD1-207ENST00000511628 MRRFQ96E11 262 aaKnown RBP5.32□□□□□ -1.56
CHD1-207ENST00000511628 ZSWIM5Q9P217 1185 aa5.32□□□□□ -1.56
CHD1-207ENST00000511628 SUPT16HQ9Y5B9 1047 aaKnown RBP5.32□□□□□ -1.56
CHD1-207ENST00000511628 PRR33A8MZF0 331 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 UPK3BL1B0FP48 263 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 UPK3BL2E5RIL1 263 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 GBP1P32455 592 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 EIF4A3P38919 411 aaKnown RBP5.31□□□□□ -1.56
CHD1-207ENST00000511628 MPP2Q14168 576 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 UBE2FQ969M7 185 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 SYTL4Q96C24 671 aaPredicted RBP5.31□□□□□ -1.56
CHD1-207ENST00000511628 RHOVQ96L33 236 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 CARS2Q9HA77 564 aaKnown RBP5.31□□□□□ -1.56
CHD1-207ENST00000511628 ATP13A1Q9HD20 1204 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 PRDM7Q9NQW5 492 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 REV1Q9UBZ9 1251 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 KCNH3Q9ULD8 1083 aa5.31□□□□□ -1.56
CHD1-207ENST00000511628 PITPNM2Q9BZ72 1349 aa5.3□□□□□ -1.56
CHD1-207ENST00000511628 FAM221AA4D161 298 aa5.3□□□□□ -1.56
CHD1-207ENST00000511628 E9PSI1 815 aa5.3□□□□□ -1.56
CHD1-207ENST00000511628 HTR3BO95264 441 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms