RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LCORLQ8N3X6 602 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 ZGPATQ8N5A5 531 aaKnown RBP8.79□□□□□ -1
TOPBP1-207ENST00000509162 MAGEB6Q8N7X4 407 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 MIGA1Q8NAN2 632 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 DDRGK1Q96HY6 314 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 HHIPL1Q96JK4 782 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 CHMP4BQ9H444 224 aaKnown RBP8.79□□□□□ -1
TOPBP1-207ENST00000509162 USP40Q9NVE5 1235 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 AATFQ9NY61 560 aaKnown RBP eCLIP8.79□□□□□ -1
TOPBP1-207ENST00000509162 SNCAIPQ9Y6H5 919 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 ZSWIM8A7E2V4 1837 aa8.79□□□□□ -1
TOPBP1-207ENST00000509162 FOXN1O15353 648 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 IDH1O75874 414 aaKnown RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 MAP4K4O95819 1239 aaPredicted RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 INPP5BP32019 993 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 ADD2P35612 726 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 PPP4CP60510 307 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 GRM1Q13255 1194 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 PICALMQ13492 652 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 VGLL4Q14135 290 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 HIC1Q14526 733 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 DEFB115Q30KQ5 88 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 TYW1BQ6NUM6 668 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 RGMBQ6NW40 437 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 FAM151AQ8WW52 585 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 LNPKQ9C0E8 428 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 OSBPL5Q9H0X9 879 aaPredicted RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 GOPCQ9HD26 462 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 ECHDC1Q9NTX5 307 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 PAG1Q9NWQ8 432 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 ANGEL1Q9UNK9 670 aaKnown RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 LOC285556D6RIA3 1793 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 MYH1P12882 1939 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 BAZ2AQ9UIF9 1905 aaKnown RBP8.78□□□□□ -1
TOPBP1-207ENST00000509162 ZNF532Q9HCE3 1301 aa8.78□□□□□ -1
TOPBP1-207ENST00000509162 BRCA2P51587 3418 aa8.77□□□□□ -1
TOPBP1-207ENST00000509162 PHF20L1A8MW92 1017 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 PRKAB2O43741 272 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 MYO1BO43795 1136 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 HSPA8P11142 646 aaKnown RBP8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 CYP7A1P22680 504 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 FKBP1BP68106 108 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 CAP1Q01518 475 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 NUCB1Q02818 461 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 SLC4A8Q2Y0W8 1093 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 MAPKAPK5Q8IW41 473 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 WNK4Q96J92 1243 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 EPAS1Q99814 870 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 EPB41L4AQ9HCS5 686 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 LRP2BPQ9P2M1 347 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 ZNF112Q9UJU3 913 aa8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 GREB1LQ9C091 1923 aaPredicted RBP8.77□□□□□ -1.01
TOPBP1-207ENST00000509162 CENPFP49454 3210 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 GRXCR2A6NFK2 248 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 PPP1R3GB7ZBB8 358 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 M0R2C6 588 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 ENTPD3O75355 529 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 CYP2D6P10635 497 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 MX1P20591 662 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 KIF23Q02241 960 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 MOGSQ13724 837 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 SPTY2D1Q68D10 685 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 MIGA2Q7L4E1 593 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 TEX11Q8IYF3 940 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 C2orf69Q8N8R5 385 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 ZKSCAN4Q969J2 545 aaPredicted RBP8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 SEC62Q99442 399 aaKnown RBP8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 IL25Q9H293 177 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 R3HDMLQ9H3Y0 253 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 ARMT1Q9H993 441 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 ELP3Q9H9T3 547 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 STAP2Q9UGK3 403 aa8.76□□□□□ -1.01
TOPBP1-207ENST00000509162 BHMG1C9JSJ3 638 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 IGF2BP3O00425 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 MBD4O95243 580 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 GSPT1P15170 499 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 FECHP22830 423 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 ZNF157P51786 506 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 PDE1AP54750 535 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 MAP3K10Q02779 954 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 DGKZQ13574 1117 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 TNFAIP1Q13829 316 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 ANKRD45Q5TZF3 282 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 SPRYD7Q5W111 196 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 PLEKHM2Q8IWE5 1019 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 TGFBRAP1Q8WUH2 860 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 SDR42E1Q8WUS8 393 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 OSBP2Q969R2 916 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 GCC1Q96CN9 775 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 WRNIP1Q96S55 665 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 CSRNP1Q96S65 589 aa8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 PUS7LQ9H0K6 701 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 SAP30BPQ9UHR5 308 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-207ENST00000509162 TTC41PQ6P2S7 1318 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms