RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TBC1D12O60347 775 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 RPS6KB1P23443 525 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 GABPAQ06546 454 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 ABCB5Q2M3G0 1257 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 CCDC178Q5BJE1 867 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 RUFY3Q7L099 469 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 DHX32Q7L7V1 743 aaKnown RBP12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 CHST3Q7LGC8 479 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 TEPSINQ96N21 525 aa12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 NAP1L2Q9ULW6 460 aaPredicted RBP12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRCC3P1-201ENST00000508559 CPA1P15085 419 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 RASA1P20936 1047 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 SHMT1P34896 483 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 ANP32AP39687 249 aaKnown RBP12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 IREB2P48200 963 aaKnown RBP12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 ATP2B2Q01814 1243 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 TMEM67Q5HYA8 995 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 NFXL1Q6ZNB6 911 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZSWIM5Q9P217 1185 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 LAMB1P07942 1786 aa12.98□□□□□ -0.33
BRCC3P1-201ENST00000508559 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 GDF11O95390 407 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 FGRP09769 529 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 ANKRD1Q15327 319 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 DLK2Q6UY11 383 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 ARMC9Q7Z3E5 817 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 METTL16Q86W50 562 aaKnown RBP12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZKSCAN3Q9BRR0 538 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 LRRC2Q9BYS8 371 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 PICK1Q9NRD5 415 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
BRCC3P1-201ENST00000508559 DDX60LQ5H9U9 1706 aaKnown RBP12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 CCDC69A6NI79 296 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 TRAF5O00463 557 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 GH2P01242 217 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 SLURP2P0DP57 97 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 AKR1B1P15121 316 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 WTAPQ15007 396 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 TATDN1Q6P1N9 297 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 Q6ZUG5 572 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 TMEM179Q6ZVK1 233 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 TMEM87BQ96K49 555 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 ZSCAN10Q96SZ4 725 aaPredicted RBP12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 DNAJC18Q9H819 358 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 CSADQ9Y600 493 aa12.96□□□□□ -0.33
BRCC3P1-201ENST00000508559 POLR2AP24928 1970 aaKnown RBP12.96□□□□□ -0.34
BRCC3P1-201ENST00000508559 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 CELF2O95319 508 aaKnown RBP12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 ASNSP08243 561 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 CAP2P40123 477 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 IFIT1BQ5T764 474 aaKnown RBP12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 HSCBQ8IWL3 235 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 C2orf69Q8N8R5 385 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 KIF2CQ99661 725 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 STX8Q9UNK0 236 aa12.95□□□□□ -0.34
BRCC3P1-201ENST00000508559 TNKSO95271 1327 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 RAD21O60216 631 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 MCM2P49736 904 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 ANTXR2P58335 489 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 EXOSC10Q01780 885 aaKnown RBP12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 MAP3K10Q02779 954 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 ICA1Q05084 483 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 BECN1Q14457 450 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 BRF1Q92994 677 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 KAT14Q9H8E8 782 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 KANSL2Q9H9L4 492 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 ZBTB21Q9ULJ3 1066 aa12.94□□□□□ -0.34
BRCC3P1-201ENST00000508559 SH2B2O14492 632 aaPredicted RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 KIF3CO14782 793 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 NMT2O60551 498 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 TOMM70O94826 608 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 TTLL1O95922 423 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 INPP5BP32019 993 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 AK2P54819 239 aa12.93□□□□□ -0.34
BRCC3P1-201ENST00000508559 SEPT2Q15019 361 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms