RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF287Q9HBT7 754 aa17.91■□□□□ 0.46
RNF4-210ENST00000508235 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
RNF4-210ENST00000508235 SAGE1Q9NXZ1 904 aa17.91■□□□□ 0.46
RNF4-210ENST00000508235 ZHX2Q9Y6X8 837 aa17.91■□□□□ 0.46
RNF4-210ENST00000508235 PHIPQ8WWQ0 1821 aa17.91■□□□□ 0.46
RNF4-210ENST00000508235 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
RNF4-210ENST00000508235 MINDY4BA8MYZ0 360 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 CXCL11O14625 94 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 SLC3A2P08195 630 aaKnown RBP17.9■□□□□ 0.46
RNF4-210ENST00000508235 SHMT1P34896 483 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 BMP2KLQ5H9B9 411 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 C16orf86Q6ZW13 317 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 MS4A4AQ96JQ5 239 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 EPB41L4AQ9HCS5 686 aaPredicted RBP17.9■□□□□ 0.46
RNF4-210ENST00000508235 KCNH4Q9UQ05 1017 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 RAD50Q92878 1312 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 ROBO3Q96MS0 1386 aa17.9■□□□□ 0.46
RNF4-210ENST00000508235 CCL15-CCL14A0A0B4J2E2 113 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 RRP1BQ14684 758 aaKnown RBP17.89■□□□□ 0.45
RNF4-210ENST00000508235 ALX1Q15699 326 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 CCL15Q16663 113 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 ABCB5Q2M3G0 1257 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 CCDC17Q96LX7 622 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 ZBTB21Q9ULJ3 1066 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 AFG3L2Q9Y4W6 797 aa17.89■□□□□ 0.45
RNF4-210ENST00000508235 CYP2D7A0A087X1C5 515 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 GDF11O95390 407 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 HSPD1P10809 573 aaKnown RBP17.88■□□□□ 0.45
RNF4-210ENST00000508235 CDK8P49336 464 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 FASTKD5Q7L8L6 764 aaKnown RBP17.88■□□□□ 0.45
RNF4-210ENST00000508235 ZNF589Q86UQ0 364 aaPredicted RBP17.88■□□□□ 0.45
RNF4-210ENST00000508235 ZNF280CQ8ND82 737 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 DYNLL2Q96FJ2 89 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 ZMYM6O95789 1325 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 PTPRFP10586 1907 aa17.88■□□□□ 0.45
RNF4-210ENST00000508235 CEP350Q5VT06 3117 aa17.87■□□□□ 0.45
RNF4-210ENST00000508235 GH2P01242 217 aa17.87■□□□□ 0.45
RNF4-210ENST00000508235 CHMLP26374 656 aa17.87■□□□□ 0.45
RNF4-210ENST00000508235 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
RNF4-210ENST00000508235 PPARAQ07869 468 aa17.87■□□□□ 0.45
RNF4-210ENST00000508235 WDR18Q9BV38 432 aa17.87■□□□□ 0.45
RNF4-210ENST00000508235 ZCCHC17Q9NP64 241 aaKnown RBP17.87■□□□□ 0.45
RNF4-210ENST00000508235 RNF186Q9NXI6 227 aa17.87■□□□□ 0.45
RNF4-210ENST00000508235 MPHOSPH10O00566 681 aaKnown RBP17.86■□□□□ 0.45
RNF4-210ENST00000508235 PDE4BQ07343 736 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 VPS53Q5VIR6 699 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 TMEM179Q6ZVK1 233 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 SLC44A5Q8NCS7 719 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 BRI3BPQ8WY22 251 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 MKNK2Q9HBH9 465 aa17.86■□□□□ 0.45
RNF4-210ENST00000508235 A0A0G2JLL6 359 aaPredicted RBP17.85■□□□□ 0.45
RNF4-210ENST00000508235 TRIM75PA6NK02 468 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 C19orf81C9J6K1 198 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 FOXN1O15353 648 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 FOXP2O15409 715 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 TRPA1O75762 1119 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 EVX2Q03828 476 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 SPP2Q13103 211 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 CASC1Q6TDU7 716 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 PRRT2Q7Z6L0 340 aaPredicted RBP17.85■□□□□ 0.45
RNF4-210ENST00000508235 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
RNF4-210ENST00000508235 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.85■□□□□ 0.45
RNF4-210ENST00000508235 USP17L10C9JJH3 530 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 IGF2BP3O00425 579 aaKnown RBP eCLIP17.84■□□□□ 0.45
RNF4-210ENST00000508235 FGAP02671 866 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 ANKRD23Q86SG2 305 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 ZNF444Q8N0Y2 327 aaPredicted RBP17.84■□□□□ 0.45
RNF4-210ENST00000508235 PTPN18Q99952 460 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 CFHR5Q9BXR6 569 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 CTNNA3Q9UI47 895 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 ANAPC4Q9UJX5 808 aa17.84■□□□□ 0.45
RNF4-210ENST00000508235 BACE1P56817 501 aa17.83■□□□□ 0.44
RNF4-210ENST00000508235 JAG1P78504 1218 aa17.83■□□□□ 0.44
RNF4-210ENST00000508235 CCDC84Q86UT8 332 aaPredicted RBP17.83■□□□□ 0.44
RNF4-210ENST00000508235 PROCA1Q8NCQ7 364 aaPredicted RBP17.83■□□□□ 0.44
RNF4-210ENST00000508235 FEZ1Q99689 392 aa17.83■□□□□ 0.44
RNF4-210ENST00000508235 TMOD4Q9NZQ9 345 aa17.83■□□□□ 0.44
RNF4-210ENST00000508235 LOC285556D6RIA3 1793 aa17.83■□□□□ 0.44
RNF4-210ENST00000508235 LAMA4Q16363 1823 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 BTBD19C9JJ37 291 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 SGSM2O43147 1006 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
RNF4-210ENST00000508235 AKR1B1P15121 316 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 SEPT2Q15019 361 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 SH3D19Q5HYK7 790 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 GADL1Q6ZQY3 521 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 STK11IPQ8N1F8 1099 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 SLC45A1Q9Y2W3 748 aa17.82■□□□□ 0.44
RNF4-210ENST00000508235 SMIM22K7EJ46 135 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 ZNF213O14771 459 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
RNF4-210ENST00000508235 RASA1P20936 1047 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 GUCY1A2P33402 732 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 USP14P54578 494 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 PABPC4Q13310 644 aaKnown RBP eCLIP17.81■□□□□ 0.441e-6■■■□□ 16.1
RNF4-210ENST00000508235 MTMR2Q13614 643 aa17.81■□□□□ 0.44
RNF4-210ENST00000508235 TAF1CQ15572 869 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms