RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 EYA2O00167 538 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 BIN1O00499 593 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 ZNF213O14771 459 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 NPHP1O15259 732 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 KIF5CO60282 957 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 DTNBO60941 627 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 POLR3DP05423 398 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC175P0C221 793 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 FDPSP14324 419 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 TXLNAP40222 546 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 PLA2G4AP47712 749 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 PIP4K2AP48426 406 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 GNG11P61952 73 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 GUCY1B3Q02153 619 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 SMC1AQ14683 1233 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 TTF1Q15361 905 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 TTC39AQ5SRH9 613 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 SPECC1LQ69YQ0 1117 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CC2D1AQ6P1N0 951 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRIM65Q6PJ69 517 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 LMBR1LQ6UX01 489 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 LEKR1Q6ZMV7 388 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 KRBA2Q6ZNG9 492 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 PPFIBP1Q86W92 1011 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 REXO1L1PQ8IX06 675 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 IFNL2Q8IZJ0 200 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 GOLGA6L1Q8N7Z2 621 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 ANKLE1Q8NAG6 615 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CNNM3Q8NE01 707 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 GOLGA5Q8TBA6 731 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 KLHDC4Q8TBB5 520 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 HNRNPLLQ8WVV9 542 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 APPBP2Q92624 585 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 SMARCE1Q969G3 411 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 LRRC59Q96AG4 307 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC51Q96ER9 411 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 DCAF5Q96JK2 942 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 TMEM87BQ96K49 555 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 PANX2Q96RD6 677 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CTAGE1Q96RT6 745 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 SEC62Q99442 399 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 ALG1Q9BT22 464 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 UTP14AQ9BVJ6 771 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CARD6Q9BX69 1037 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 UBXN6Q9BZV1 441 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 CWC25Q9NXE8 425 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 ANGEL1Q9UNK9 670 aaKnown RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 IQSEC3Q9UPP2 1182 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 MRFAP1Q9Y605 127 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 PARP3Q9Y6F1 533 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 STK36Q9NRP7 1315 aa5.67□□□□□ -1.5
HMGB3P16-201ENST00000508037 A0A0U1RQG5 324 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 VWA3AA6NCI4 1184 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 AKR1B15C9JRZ8 316 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRIM66O15016 1216 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 BMP15O95972 392 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 PHKG2P15735 406 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 ERCC5P28715 1186 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 OAS2P29728 719 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 METAP2P50579 478 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 CASP7P55210 303 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 HNRNPH2P55795 449 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 PIP4K2BP78356 416 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 TBX2Q13207 712 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 COL9A3Q14050 684 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 TRIM14Q14142 442 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 WASHC4Q2M389 1173 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 FILIP1LQ4L180 1135 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 HSP90B2PQ58FF3 399 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 RILPL1Q5EBL4 403 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 ESCO1Q5FWF5 840 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 KRT40Q6A162 431 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 RSRC2Q7L4I2 434 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 HDXQ7Z353 690 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 MB21D2Q8IYB1 491 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 PDILTQ8N807 584 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 IQUBQ8NA54 791 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC191Q8NCU4 936 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 ANKRD20A12PQ8NF67 263 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 ENOX1Q8TC92 643 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 PYM1Q9BRP8 204 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 REPIN1Q9BWE0 567 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 FAM107BQ9H098 131 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 TMEM51Q9NW97 253 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 RAI14Q9P0K7 980 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 MYO1AQ9UBC5 1043 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 MKRN1Q9UHC7 482 aaKnown RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 KCNH3Q9ULD8 1083 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 TBC1D2BQ9UPU7 963 aa5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P16-201ENST00000508037 MST1RQ04912 1400 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CCDC196A0A1B0GTZ2 297 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 A0A1B0GUL7 405 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 PRAMEF22A3QJZ6 481 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 CTAGE9A4FU28 777 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 M0R2C6 588 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 PPEF1O14829 653 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 POLR3GO15318 223 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 TBC1D8O95759 1140 aa5.65□□□□□ -1.5
HMGB3P16-201ENST00000508037 IARSP41252 1262 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms