RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ADGRE1Q14246 886 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 NKG7Q16617 165 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 DIEXFQ68CQ4 756 aaKnown RBP5.38□□□□□ -1.55
LSM6-205ENST00000507449 ANKRD34AQ69YU3 496 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 OVOS1Q6IE37 1185 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 FDX2Q6P4F2 183 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 ANKS3Q6ZW76 656 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 DPH6Q7L8W6 267 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 DYMQ7RTS9 669 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 PMFBP1Q8TBY8 1022 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 HNRNPLLQ8WVV9 542 aaKnown RBP5.38□□□□□ -1.55
LSM6-205ENST00000507449 TMEM40Q8WWA1 233 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 WFDC12Q8WWY7 111 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 ISL2Q96A47 359 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 FAM46AQ96IP4 442 aaKnown RBP5.38□□□□□ -1.55
LSM6-205ENST00000507449 TNKS2Q9H2K2 1166 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 GMIPQ9P107 970 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 TJP2Q9UDY2 1190 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 PRKAG3Q9UGI9 489 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 USP21Q9UK80 565 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 ADAM30Q9UKF2 790 aa5.38□□□□□ -1.55
LSM6-205ENST00000507449 UPK3BL1B0FP48 263 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 CHURC1-FNTBB4DL54 471 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 C9orf172C9J069 976 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 UPK3BL2E5RIL1 263 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 H2AFB1P0C5Y9 115 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 H2AFB2P0C5Z0 115 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 ACRP10323 421 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 IMPDH2P12268 514 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 IRAK1P51617 712 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 ETF1P62495 437 aaKnown RBP5.37□□□□□ -1.55
LSM6-205ENST00000507449 SLBPQ14493 270 aaKnown RBP eCLIP5.37□□□□□ -1.55
LSM6-205ENST00000507449 CDPF1Q6NVV7 123 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 ATG4CQ96DT6 458 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 MEGF10Q96KG7 1140 aa5.37□□□□□ -1.55
LSM6-205ENST00000507449 HIRIP3Q9BW71 556 aaPredicted RBP5.37□□□□□ -1.55
LSM6-205ENST00000507449 GLB1P16278 677 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 ASPAP45381 313 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 NRG1Q02297 640 aaPredicted RBP5.36□□□□□ -1.55
LSM6-205ENST00000507449 PDE4BQ07343 736 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 ZYXQ15942 572 aaKnown RBP5.36□□□□□ -1.55
LSM6-205ENST00000507449 CCDC144BQ3MJ40 725 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 MCATQ8IVS2 390 aaKnown RBP5.36□□□□□ -1.55
LSM6-205ENST00000507449 MRPL41Q8IXM3 137 aaKnown RBP5.36□□□□□ -1.55
LSM6-205ENST00000507449 DZIP1LQ8IYY4 767 aaKnown RBP5.36□□□□□ -1.55
LSM6-205ENST00000507449 ARMC10Q8N2F6 343 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 CELF2-AS1Q8N7Q2 184 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 OR6P1Q8NGX9 317 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 TMEM87BQ96K49 555 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 PIF1Q9H611 641 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 ACSS3Q9H6R3 686 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 CNNM2Q9H8M5 875 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 KLHL3Q9UH77 587 aa5.36□□□□□ -1.55
LSM6-205ENST00000507449 A0A1W2PQH9 124 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 NME1P15531 152 aaKnown RBP5.35□□□□□ -1.55
LSM6-205ENST00000507449 CASP7P55210 303 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 RAB33AQ14088 237 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 SGO2Q562F6 1265 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 ARSHQ5FYA8 562 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 CDCP2Q5VXM1 449 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.35□□□□□ -1.55
LSM6-205ENST00000507449 HID1Q8IV36 788 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 CKAP2LQ8IYA6 745 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 SMYD4Q8IYR2 804 aaPredicted RBP5.35□□□□□ -1.55
LSM6-205ENST00000507449 TAB3Q8N5C8 712 aaPredicted RBP5.35□□□□□ -1.55
LSM6-205ENST00000507449 ZNF507Q8TCN5 953 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 MICAL1Q8TDZ2 1067 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 CRBNQ96SW2 442 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 DPH2Q9BQC3 489 aaPredicted RBP5.35□□□□□ -1.55
LSM6-205ENST00000507449 PICK1Q9NRD5 415 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 RNF114Q9Y508 228 aa5.35□□□□□ -1.55
LSM6-205ENST00000507449 RBAK-RBAKDNI3L0D1 243 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 TNFRSF10CO14798 259 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 DYNC1LI2O43237 492 aaPredicted RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 RNGTTO60942 597 aaKnown RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 RAB6AP20340 208 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 GUCY2CP25092 1073 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 POLR2BP30876 1174 aaKnown RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 CAP2P40123 477 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 LRRFIP1Q32MZ4 808 aaKnown RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 TNNI3KQ59H18 835 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 NBPF6Q5VWK0 638 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 SLC6A19Q695T7 634 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 NLRC3Q7RTR2 1065 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 TTC6Q86TZ1 520 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 TXNRD3Q86VQ6 643 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 SLFN12Q8IYM2 578 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 C19orf47Q8N9M1 422 aaKnown RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 FAM13CQ8NE31 585 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 FBLIM1Q8WUP2 373 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 EZH1Q92800 747 aaPredicted RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 NBPF4Q96M43 638 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 SLC9A7Q96T83 725 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 TM9SF2Q99805 663 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 SSBP4Q9BWG4 385 aaPredicted RBP5.34□□□□□ -1.55
LSM6-205ENST00000507449 CEP41Q9BYV8 373 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 OSBPL2Q9H1P3 480 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 SEMA6CQ9H3T2 930 aa5.34□□□□□ -1.55
LSM6-205ENST00000507449 LTBP3Q9NS15 1303 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms