RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CACNB2Q08289 660 aaPredicted RBP20.31■□□□□ 0.84
SNF8-205ENST00000507302 MTMR2Q13614 643 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 MORN1Q5T089 497 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 GPRC5AQ8NFJ5 357 aa20.31■□□□□ 0.84
SNF8-205ENST00000507302 API5Q9BZZ5 524 aaKnown RBP20.31■□□□□ 0.84
SNF8-205ENST00000507302 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
SNF8-205ENST00000507302 POTEB2H3BUK9 544 aa20.3■□□□□ 0.84
SNF8-205ENST00000507302 MAPK4P31152 587 aa20.3■□□□□ 0.84
SNF8-205ENST00000507302 PPP4CP60510 307 aa20.3■□□□□ 0.84
SNF8-205ENST00000507302 IRX3P78415 501 aaPredicted RBP20.3■□□□□ 0.84
SNF8-205ENST00000507302 FAM109BQ6ICB4 259 aaPredicted RBP20.3■□□□□ 0.84
SNF8-205ENST00000507302 TEX11Q8IYF3 940 aa20.3■□□□□ 0.84
SNF8-205ENST00000507302 UBE2OQ9C0C9 1292 aaKnown RBP20.3■□□□□ 0.84
SNF8-205ENST00000507302 PEX10O60683 326 aa20.29■□□□□ 0.84
SNF8-205ENST00000507302 MCAMP43121 646 aa20.29■□□□□ 0.84
SNF8-205ENST00000507302 Q3C1V9 767 aa20.29■□□□□ 0.84
SNF8-205ENST00000507302 SH3RF3Q8TEJ3 882 aaPredicted RBP20.29■□□□□ 0.84
SNF8-205ENST00000507302 GTF3C2Q8WUA4 911 aaPredicted RBP20.29■□□□□ 0.84
SNF8-205ENST00000507302 SRGAP3O43295 1099 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 ERVK-9P63128 1117 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 ERVK-24P63145 666 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 LRRC26Q2I0M4 334 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 FOXP4Q8IVH2 680 aaPredicted RBP20.28■□□□□ 0.84
SNF8-205ENST00000507302 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 PORCNQ9H237 461 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 TMOD4Q9NZQ9 345 aa20.28■□□□□ 0.84
SNF8-205ENST00000507302 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
SNF8-205ENST00000507302 USP17L10C9JJH3 530 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 IGSF3O75054 1194 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 IGHA2P01877 340 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
SNF8-205ENST00000507302 CCND3P30281 292 aaPredicted RBP20.27■□□□□ 0.84
SNF8-205ENST00000507302 GPR142Q7Z601 462 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 ARHGAP45Q92619 1136 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 RAI14Q9P0K7 980 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 LTBP2Q14767 1821 aa20.27■□□□□ 0.84
SNF8-205ENST00000507302 VCANP13611 3396 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 GNAI3P08754 354 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 RGS2P41220 211 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 CCL14Q16627 93 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 SHROOM1Q2M3G4 852 aaPredicted RBP20.26■□□□□ 0.83
SNF8-205ENST00000507302 C12orf42Q96LP6 360 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 NEUROD6Q96NK8 337 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 APBA2Q99767 749 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 EMILIN3Q9NT22 766 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 FLT1P17948 1338 aa20.26■□□□□ 0.83
SNF8-205ENST00000507302 UQCRFS1P1P0C7P4 283 aa20.25■□□□□ 0.83
SNF8-205ENST00000507302 PLCG2P16885 1265 aa20.25■□□□□ 0.83
SNF8-205ENST00000507302 PDE3AQ14432 1141 aa20.25■□□□□ 0.83
SNF8-205ENST00000507302 ZBTB21Q9ULJ3 1066 aa20.25■□□□□ 0.83
SNF8-205ENST00000507302 SPTBN5Q9NRC6 3674 aaKnown RBP20.25■□□□□ 0.83
SNF8-205ENST00000507302 EYSQ5T1H1 3165 aa20.24■□□□□ 0.83
SNF8-205ENST00000507302 PLEKHH3Q7Z736 793 aa20.24■□□□□ 0.83
SNF8-205ENST00000507302 ADGRA1Q86SQ6 560 aa20.24■□□□□ 0.83
SNF8-205ENST00000507302 GUCD1Q96NT3 240 aa20.24■□□□□ 0.83
SNF8-205ENST00000507302 COL25A1Q9BXS0 654 aaPredicted RBP20.24■□□□□ 0.83
SNF8-205ENST00000507302 RLFQ13129 1914 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 CNMDO75829 334 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 BAG3O95817 575 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 HOXC6P09630 235 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 MAP2K5Q13163 448 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 LBX2Q6XYB7 198 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 GPR108Q9NPR9 543 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 AATFQ9NY61 560 aaKnown RBP eCLIP20.23■□□□□ 0.838e-6■■■■□ 21.3
SNF8-205ENST00000507302 LRP2BPQ9P2M1 347 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 RABGAP1Q9Y3P9 1069 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 MYH1P12882 1939 aa20.23■□□□□ 0.83
SNF8-205ENST00000507302 NAA16Q6N069 864 aaPredicted RBP20.22■□□□□ 0.83
SNF8-205ENST00000507302 USP17L2Q6R6M4 530 aa20.22■□□□□ 0.83
SNF8-205ENST00000507302 TGFBRAP1Q8WUH2 860 aa20.22■□□□□ 0.83
SNF8-205ENST00000507302 ZNF512BQ96KM6 892 aaPredicted RBP20.22■□□□□ 0.83
SNF8-205ENST00000507302 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
SNF8-205ENST00000507302 RARSP54136 660 aaKnown RBP20.21■□□□□ 0.83
SNF8-205ENST00000507302 MDM2Q00987 491 aaPredicted RBP20.21■□□□□ 0.83
SNF8-205ENST00000507302 GORABQ5T7V8 394 aa20.21■□□□□ 0.83
SNF8-205ENST00000507302 TATDN1Q6P1N9 297 aa20.21■□□□□ 0.83
SNF8-205ENST00000507302 MAPKAPK5Q8IW41 473 aa20.21■□□□□ 0.83
SNF8-205ENST00000507302 FLRT1Q9NZU1 646 aa20.21■□□□□ 0.83
SNF8-205ENST00000507302 PALD1Q9ULE6 856 aa20.21■□□□□ 0.83
SNF8-205ENST00000507302 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
SNF8-205ENST00000507302 GDF11O95390 407 aa20.2■□□□□ 0.82
SNF8-205ENST00000507302 CYP2E1P05181 493 aaPredicted RBP20.2■□□□□ 0.82
SNF8-205ENST00000507302 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.2■□□□□ 0.82
SNF8-205ENST00000507302 EDC3Q96F86 508 aaKnown RBP20.2■□□□□ 0.82
SNF8-205ENST00000507302 NOL10Q9BSC4 688 aaKnown RBP20.2■□□□□ 0.82
SNF8-205ENST00000507302 PNMA6EA0A0J9YXQ4 647 aa20.19■□□□□ 0.82
SNF8-205ENST00000507302 SLC15A5A6NIM6 579 aa20.19■□□□□ 0.82
SNF8-205ENST00000507302 CDH23Q9H251 3354 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 MSCO60682 206 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 PTPREP23469 700 aa20.18■□□□□ 0.82
SNF8-205ENST00000507302 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms