RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SLFN12Q8IYM2 578 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 SHKBP1Q8TBC3 707 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 TBC1D32Q96NH3 1257 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 DUSP23Q9BVJ7 150 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 CCSER2Q9H7U1 834 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 PCDHB14Q9Y5E9 798 aa4.8□□□□□ -1.64
GYPB-207ENST00000506679 FAM170BA6NMN3 283 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 ZNF165P49910 485 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 CLCQ05315 142 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 FAM214BQ7L5A3 538 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 NPM2Q86SE8 214 aaKnown RBP4.79□□□□□ -1.64
GYPB-207ENST00000506679 MFSD2AQ8NA29 543 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 METTL22Q9BUU2 404 aaPredicted RBP4.79□□□□□ -1.64
GYPB-207ENST00000506679 FOXQ1Q9C009 403 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 LGR6Q9HBX8 967 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 SSU72Q9NP77 194 aaKnown RBP4.79□□□□□ -1.64
GYPB-207ENST00000506679 PRDM10Q9NQV6 1147 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 GINM1Q9NU53 330 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 ZNRF3Q9ULT6 936 aa4.79□□□□□ -1.64
GYPB-207ENST00000506679 LEFTY1O75610 366 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 SLITRK5O94991 958 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 EOMESO95936 686 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 FAM87AP0C7U9 286 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 CYP27A1Q02318 531 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 ZNF765Q7L2R6 523 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 SLC43A3Q8NBI5 491 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 GMIPQ9P107 970 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 INPP5FQ9Y2H2 1132 aa4.78□□□□□ -1.64
GYPB-207ENST00000506679 COL17A1Q9UMD9 1497 aaPredicted RBP4.77□□□□□ -1.65
GYPB-207ENST00000506679 SLC22A31A6NKX4 558 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 UPK3BL1B0FP48 263 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 WDR64B1ANS9 1081 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 UPK3BL2E5RIL1 263 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 ATF4P18848 351 aaPredicted RBP4.77□□□□□ -1.65
GYPB-207ENST00000506679 YARSP54577 528 aaKnown RBP4.77□□□□□ -1.65
GYPB-207ENST00000506679 CDCP2Q5VXM1 449 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 GK5Q6ZS86 529 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 FBXL6Q8N531 539 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 TOP6BLQ8N6T0 577 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 RBBP8NLQ8NC74 664 aaPredicted RBP4.77□□□□□ -1.65
GYPB-207ENST00000506679 FAM13CQ8NE31 585 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 DNAJB8Q8NHS0 232 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 GIMAP7Q8NHV1 300 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 PPP1R13LQ8WUF5 828 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 SEC16BQ96JE7 1060 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 C8orf37Q96NL8 207 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 GMLQ99445 158 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 DPH2Q9BQC3 489 aaPredicted RBP4.77□□□□□ -1.65
GYPB-207ENST00000506679 CNNM2Q9H8M5 875 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 RNF112Q9ULX5 631 aa4.77□□□□□ -1.65
GYPB-207ENST00000506679 CHURC1-FNTBB4DL54 471 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 IGF2BP3O00425 579 aaKnown RBP eCLIP4.76□□□□□ -1.65
GYPB-207ENST00000506679 TGFB1P01137 390 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 IMPDH2P12268 514 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 ZC3H6P61129 1189 aaKnown RBP4.76□□□□□ -1.65
GYPB-207ENST00000506679 CYP27C1Q4G0S4 372 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 OVOS1Q6IE37 1185 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 LETMD1Q6P1Q0 360 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 C22orf34Q6ZV56 151 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 RIN3Q8TB24 985 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 TMEM40Q8WWA1 233 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 HEXIM2Q96MH2 286 aaKnown RBP4.76□□□□□ -1.65
GYPB-207ENST00000506679 PIM2Q9P1W9 311 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 PPT2Q9UMR5 302 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 EFR3BQ9Y2G0 817 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 U3KQE9 123 aa4.76□□□□□ -1.65
GYPB-207ENST00000506679 TNFRSF10CO14798 259 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 FGRP09769 529 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 FOSL1P15407 271 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 MCM4P33991 863 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 NASPP49321 788 aaPredicted RBP4.75□□□□□ -1.65
GYPB-207ENST00000506679 MLECQ14165 292 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 LRRFIP1Q32MZ4 808 aaKnown RBP4.75□□□□□ -1.65
GYPB-207ENST00000506679 NLRC3Q7RTR2 1065 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 TAB3Q8N5C8 712 aaPredicted RBP4.75□□□□□ -1.65
GYPB-207ENST00000506679 ATG4CQ96DT6 458 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 MIPEPQ99797 713 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 OSBPL1AQ9BXW6 950 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 ANTXR1Q9H6X2 564 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 MKNK2Q9HBH9 465 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 CAPN10Q9HC96 672 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 ATG3Q9NT62 314 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 KLHL3Q9UH77 587 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 MAPK8IP1Q9UQF2 711 aa4.75□□□□□ -1.65
GYPB-207ENST00000506679 CNTNAP4Q9C0A0 1308 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 KIAA1324LA8MWY0 1029 aaPredicted RBP4.74□□□□□ -1.65
GYPB-207ENST00000506679 RGS13O14921 159 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 ZNF865P0CJ78 1059 aaPredicted RBP4.74□□□□□ -1.65
GYPB-207ENST00000506679 NME1P15531 152 aaKnown RBP4.74□□□□□ -1.65
GYPB-207ENST00000506679 HOXA10P31260 410 aaPredicted RBP4.74□□□□□ -1.65
GYPB-207ENST00000506679 GIPRP48546 466 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 CD97P48960 835 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 OXCT1P55809 520 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 MSMPQ1L6U9 139 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 ARSHQ5FYA8 562 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 DUSP27Q5VZP5 1158 aa4.74□□□□□ -1.65
GYPB-207ENST00000506679 LSRQ86X29 649 aaPredicted RBP4.74□□□□□ -1.65
GYPB-207ENST00000506679 XAGE3Q8WTP9 111 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms