RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CD2BP2O95400 341 aaKnown RBP16.49■□□□□ 0.23
SERF1B-204ENST00000506542 CYP2D6P10635 497 aa16.49■□□□□ 0.23
SERF1B-204ENST00000506542 CTCFP49711 727 aaPredicted RBP16.49■□□□□ 0.23
SERF1B-204ENST00000506542 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SERF1B-204ENST00000506542 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
SERF1B-204ENST00000506542 MS4A4AQ96JQ5 239 aa16.49■□□□□ 0.23
SERF1B-204ENST00000506542 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
SERF1B-204ENST00000506542 COL2A1P02458 1487 aaPredicted RBP16.48■□□□□ 0.23
SERF1B-204ENST00000506542 SPDYE5A6NIY4 337 aa16.48■□□□□ 0.23
SERF1B-204ENST00000506542 ST18O60284 1047 aa16.48■□□□□ 0.23
SERF1B-204ENST00000506542 ZBTB48P10074 688 aaPredicted RBP16.48■□□□□ 0.23
SERF1B-204ENST00000506542 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
SERF1B-204ENST00000506542 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
SERF1B-204ENST00000506542 RNF20Q5VTR2 975 aa16.48■□□□□ 0.23
SERF1B-204ENST00000506542 HTTP42858 3142 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 SLC27A2O14975 620 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 GPAA1O43292 621 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 HSPD1P10809 573 aaKnown RBP16.47■□□□□ 0.23
SERF1B-204ENST00000506542 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
SERF1B-204ENST00000506542 TM4SF4P48230 202 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 PLCD1P51178 756 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 PTPRFP10586 1907 aa16.47■□□□□ 0.23
SERF1B-204ENST00000506542 GDF11O95390 407 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 NEK4P51957 841 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 TSGA10IPQ3SY00 556 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 ERO1BQ86YB8 467 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 K7ELQ4 463 aaPredicted RBP16.46■□□□□ 0.23
SERF1B-204ENST00000506542 DGKZQ13574 1117 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 CCL15Q16663 113 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 SCYL3Q8IZE3 742 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
SERF1B-204ENST00000506542 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 DCP1AQ9NPI6 582 aaPredicted RBP16.46■□□□□ 0.23
SERF1B-204ENST00000506542 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
SERF1B-204ENST00000506542 MANSC4A6NHS7 340 aaPredicted RBP16.45■□□□□ 0.22
SERF1B-204ENST00000506542 FOXP2O15409 715 aa16.45■□□□□ 0.22
SERF1B-204ENST00000506542 PTPRAP18433 802 aa16.45■□□□□ 0.22
SERF1B-204ENST00000506542 NOL9Q5SY16 702 aaKnown RBP16.45■□□□□ 0.22
SERF1B-204ENST00000506542 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
SERF1B-204ENST00000506542 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
SERF1B-204ENST00000506542 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
SERF1B-204ENST00000506542 ZHX2Q9Y6X8 837 aa16.45■□□□□ 0.22
SERF1B-204ENST00000506542 TBC1D12O60347 775 aa16.44■□□□□ 0.22
SERF1B-204ENST00000506542 IGSF3O75054 1194 aa16.44■□□□□ 0.22
SERF1B-204ENST00000506542 SREBF2Q12772 1141 aa16.44■□□□□ 0.22
SERF1B-204ENST00000506542 SLC44A5Q8NCS7 719 aa16.44■□□□□ 0.22
SERF1B-204ENST00000506542 DYNLL2Q96FJ2 89 aa16.44■□□□□ 0.22
SERF1B-204ENST00000506542 UPF3BQ9BZI7 483 aaKnown RBP16.44■□□□□ 0.22
SERF1B-204ENST00000506542 DHX36Q9H2U1 1008 aaKnown RBP16.44■□□□□ 0.22
SERF1B-204ENST00000506542 SLC4A4Q9Y6R1 1079 aa16.44■□□□□ 0.22
SERF1B-204ENST00000506542 PPIL2Q13356 520 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 ADCK5Q3MIX3 580 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 MYH8P13535 1937 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 TRIM75PA6NK02 468 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 CTNND1O60716 968 aaKnown RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 HLA-DOAP06340 250 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 CYP21A2P08686 494 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 CASTP20810 708 aaKnown RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 MCM2P49736 904 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 PPATQ06203 517 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 MOGSQ13724 837 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 STK11IPQ8N1F8 1099 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 JAKMIP1Q96N16 626 aaKnown RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 STRBPQ96SI9 672 aaKnown RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
SERF1B-204ENST00000506542 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
SERF1B-204ENST00000506542 BTBD19C9JJ37 291 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 CAP2P40123 477 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 GTF2A2P52657 109 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 KRT32Q14532 448 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 TTC14Q96N46 770 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 CTNNA3Q9UI47 895 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 TAF6LQ9Y6J9 622 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 ZSWIM8A7E2V4 1837 aa16.42■□□□□ 0.22
SERF1B-204ENST00000506542 TESPA1A2RU30 521 aaPredicted RBP16.41■□□□□ 0.22
SERF1B-204ENST00000506542 CA12O43570 354 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 PSMA5P28066 241 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 CRHR2Q13324 411 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 METTL16Q86W50 562 aaKnown RBP16.41■□□□□ 0.22
SERF1B-204ENST00000506542 CERS3Q8IU89 383 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
SERF1B-204ENST00000506542 SAGE1Q9NXZ1 904 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 AFG3L2Q9Y4W6 797 aa16.41■□□□□ 0.22
SERF1B-204ENST00000506542 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 USP17L12C9JPN9 530 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 USP17L21D6R901 530 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
SERF1B-204ENST00000506542 SHMT1P34896 483 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 SNAPC2Q13487 334 aa16.4■□□□□ 0.22
SERF1B-204ENST00000506542 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms