RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FAM86C2PA6NEL3 165 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 KLF4O43474 513 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
HERC4-213ENST00000506515 SGO2Q562F6 1265 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 NLRC3Q7RTR2 1065 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 TXNRD3Q86VQ6 643 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 FBLIM1Q8WUP2 373 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 FAM46AQ96IP4 442 aaKnown RBP9.01□□□□□ -0.97
HERC4-213ENST00000506515 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 TM9SF2Q99805 663 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 TNKS2Q9H2K2 1166 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 PCOLCE2Q9UKZ9 415 aa9.01□□□□□ -0.97
HERC4-213ENST00000506515 KRBA1A5PL33 1030 aa9□□□□□ -0.97
HERC4-213ENST00000506515 U2SURPO15042 1029 aaKnown RBP9□□□□□ -0.97
HERC4-213ENST00000506515 NME1P15531 152 aaKnown RBP9□□□□□ -0.97
HERC4-213ENST00000506515 RAG1P15918 1043 aa9□□□□□ -0.97
HERC4-213ENST00000506515 GUCY2CP25092 1073 aa9□□□□□ -0.97
HERC4-213ENST00000506515 RXRBP28702 533 aa9□□□□□ -0.97
HERC4-213ENST00000506515 RAB33AQ14088 237 aa9□□□□□ -0.97
HERC4-213ENST00000506515 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
HERC4-213ENST00000506515 SLC6A19Q695T7 634 aa9□□□□□ -0.97
HERC4-213ENST00000506515 MRPL41Q8IXM3 137 aaKnown RBP9□□□□□ -0.97
HERC4-213ENST00000506515 PHACTR4Q8IZ21 702 aa9□□□□□ -0.97
HERC4-213ENST00000506515 XAGE3Q8WTP9 111 aa9□□□□□ -0.97
HERC4-213ENST00000506515 UTP4Q969X6 686 aaKnown RBP9□□□□□ -0.97
HERC4-213ENST00000506515 OSBPL2Q9H1P3 480 aa9□□□□□ -0.97
HERC4-213ENST00000506515 ACSS3Q9H6R3 686 aa9□□□□□ -0.97
HERC4-213ENST00000506515 ZSWIM4Q9H7M6 989 aa9□□□□□ -0.97
HERC4-213ENST00000506515 CNNM2Q9H8M5 875 aa9□□□□□ -0.97
HERC4-213ENST00000506515 RNF225M0QZC1 329 aaPredicted RBP8.99□□□□□ -0.97
HERC4-213ENST00000506515 NFICP08651 508 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 BMP3P12645 472 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 CHRNA4P43681 627 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 SLBPQ14493 270 aaKnown RBP eCLIP8.99□□□□□ -0.97
HERC4-213ENST00000506515 NBPF6Q5VWK0 638 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 PRAMEF13Q5VWM6 474 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 CDCP2Q5VXM1 449 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.99□□□□□ -0.97
HERC4-213ENST00000506515 TTC6Q86TZ1 520 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 DZIP1LQ8IYY4 767 aaKnown RBP8.99□□□□□ -0.97
HERC4-213ENST00000506515 NBPF4Q96M43 638 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 YIPF2Q9BWQ6 316 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 SEMA6CQ9H3T2 930 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 ST7Q9NRC1 585 aa8.99□□□□□ -0.97
HERC4-213ENST00000506515 A0A1W2PQH9 124 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 ACRP10323 421 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 POLR2BP30876 1174 aaKnown RBP8.98□□□□□ -0.97
HERC4-213ENST00000506515 CASP7P55210 303 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 ARMC10Q8N2F6 343 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 MYRFLQ96LU7 910 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 SLC9A7Q96T83 725 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 KCNF1Q9H3M0 494 aa8.98□□□□□ -0.97
HERC4-213ENST00000506515 C1QTNF9BB2RNN3 333 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 BMS1Q14692 1282 aaKnown RBP8.97□□□□□ -0.97
HERC4-213ENST00000506515 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
HERC4-213ENST00000506515 UVSSAQ2YD98 709 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 CD163Q86VB7 1156 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 SLFN12Q8IYM2 578 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 CELF2-AS1Q8N7Q2 184 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 DCAF5Q96JK2 942 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 KIF2CQ99661 725 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 FOXQ1Q9C009 403 aa8.97□□□□□ -0.97
HERC4-213ENST00000506515 CCDC85CA6NKD9 419 aa8.96□□□□□ -0.98
HERC4-213ENST00000506515 TNFRSF10CO14798 259 aa8.96□□□□□ -0.98
HERC4-213ENST00000506515 CST3P01034 146 aaPredicted RBP8.96□□□□□ -0.98
HERC4-213ENST00000506515 MAP4P27816 1152 aaKnown RBP8.96□□□□□ -0.98
HERC4-213ENST00000506515 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
HERC4-213ENST00000506515 UNC5AQ6ZN44 842 aa8.96□□□□□ -0.98
HERC4-213ENST00000506515 ARMCX6Q7L4S7 300 aa8.96□□□□□ -0.98
HERC4-213ENST00000506515 TAB3Q8N5C8 712 aaPredicted RBP8.96□□□□□ -0.98
HERC4-213ENST00000506515 C19orf47Q8N9M1 422 aaKnown RBP8.96□□□□□ -0.98
HERC4-213ENST00000506515 SIRPGQ9P1W8 387 aa8.96□□□□□ -0.98
HERC4-213ENST00000506515 SHROOM4Q9ULL8 1493 aa8.96□□□□□ -0.98
HERC4-213ENST00000506515 DYNC1LI2O43237 492 aaPredicted RBP8.95□□□□□ -0.98
HERC4-213ENST00000506515 LRIG2O94898 1065 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 GBP1P32455 592 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 CAP2P40123 477 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 SERINC3Q13530 473 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 MAP7Q14244 749 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 FAM20CQ8IXL6 584 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 BAHD1Q8TBE0 780 aaPredicted RBP8.95□□□□□ -0.98
HERC4-213ENST00000506515 EZH1Q92800 747 aaPredicted RBP8.95□□□□□ -0.98
HERC4-213ENST00000506515 CCDC74BQ96LY2 380 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 PIF1Q9H611 641 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 STK17AQ9UEE5 414 aa8.95□□□□□ -0.98
HERC4-213ENST00000506515 FAM95CA0A1B0GW59 222 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 K7ELQ4 463 aaPredicted RBP8.94□□□□□ -0.98
HERC4-213ENST00000506515 FXNQ16595 210 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 DDR2Q16832 855 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 MFSD2AQ8NA29 543 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 SLC12A7Q9Y666 1083 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 LTBP3Q9NS15 1303 aa8.94□□□□□ -0.98
HERC4-213ENST00000506515 RGS13O14921 159 aa8.93□□□□□ -0.98
HERC4-213ENST00000506515 DHX15O43143 795 aaKnown RBP8.93□□□□□ -0.98
HERC4-213ENST00000506515 DDAH1O94760 285 aa8.93□□□□□ -0.98
HERC4-213ENST00000506515 BEND4Q6ZU67 534 aa8.93□□□□□ -0.98
HERC4-213ENST00000506515 CYB5D2Q8WUJ1 264 aa8.93□□□□□ -0.98
HERC4-213ENST00000506515 SRPK1Q96SB4 655 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms