RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 Q7L0L9 218 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 DEFB123Q8N688 67 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 GPRC5AQ8NFJ5 357 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 ZNF384Q8TF68 577 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 TRIB2Q92519 343 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 PI4KBQ9UBF8 816 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 HERC5Q9UII4 1024 aaKnown RBP10.12□□□□□ -0.79
SNF8-204ENST00000506104 PALD1Q9ULE6 856 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 TNNQ9UQP3 1299 aa10.12□□□□□ -0.79
SNF8-204ENST00000506104 USP17L10C9JJH3 530 aa10.11□□□□□ -0.79
SNF8-204ENST00000506104 IPO8O15397 1037 aaKnown RBP10.11□□□□□ -0.79
SNF8-204ENST00000506104 ASNSP08243 561 aa10.11□□□□□ -0.79
SNF8-204ENST00000506104 PLCG2P16885 1265 aa10.11□□□□□ -0.79
SNF8-204ENST00000506104 MAGEA10P43363 369 aaPredicted RBP10.11□□□□□ -0.79
SNF8-204ENST00000506104 RARSP54136 660 aaKnown RBP10.11□□□□□ -0.79
SNF8-204ENST00000506104 SHROOM1Q2M3G4 852 aaPredicted RBP10.11□□□□□ -0.79
SNF8-204ENST00000506104 SAMD1Q6SPF0 538 aaPredicted RBP10.11□□□□□ -0.79
SNF8-204ENST00000506104 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
SNF8-204ENST00000506104 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
SNF8-204ENST00000506104 SIPA1L1O43166 1804 aa10.11□□□□□ -0.79
SNF8-204ENST00000506104 FOCADQ5VW36 1801 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 PNMA6EA0A0J9YXQ4 647 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 A0A1W2PPC1 479 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 SURF6O75683 361 aaKnown RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 BCAR3O75815 825 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 IDH1O75874 414 aaKnown RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 MAP4K4O95819 1239 aaPredicted RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 CT47B1P0C2W7 299 aaPredicted RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 CYP7A1P22680 504 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 ARID4AP29374 1257 aaPredicted RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 BACE1P56817 501 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 HERVK_113P62684 666 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 DYNLL1P63167 89 aaKnown RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 RAB3GAP1Q15042 981 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 CCL14Q16627 93 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 MIGA1Q8NAN2 632 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 DBNDD2Q9BQY9 259 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 DHX36Q9H2U1 1008 aaKnown RBP10.1□□□□□ -0.79
SNF8-204ENST00000506104 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 TXNRD2Q9NNW7 524 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 GJD2Q9UKL4 321 aa10.1□□□□□ -0.79
SNF8-204ENST00000506104 FLT1P17948 1338 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 C19orf81C9J6K1 198 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 GH2P01242 217 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 CAPN2P17655 700 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 CCND3P30281 292 aaPredicted RBP10.09□□□□□ -0.79
SNF8-204ENST00000506104 MAPK4P31152 587 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 RGS2P41220 211 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 JAG1P78504 1218 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 USP17L2Q6R6M4 530 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 ATF7IPQ6VMQ6 1270 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 PLEKHH3Q7Z736 793 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 SOCS4Q8WXH5 440 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 PORCNQ9H237 461 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 PRO3102Q9H379 93 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 ZBTB21Q9ULJ3 1066 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 FRMPD3Q5JV73 1810 aa10.09□□□□□ -0.79
SNF8-204ENST00000506104 MYH8P13535 1937 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 ZAP70P43403 619 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 ATN1P54259 1190 aaPredicted RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 ERVK-9P63128 1117 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 ERVK-24P63145 666 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 CACNB2Q08289 660 aaPredicted RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 Q3C1V9 767 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 TNNI3KQ59H18 835 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 GPR142Q7Z601 462 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 ADGRA1Q86SQ6 560 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 FOXP4Q8IVH2 680 aaPredicted RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 TDHQ8IZJ6 230 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 FAM161BQ96MY7 647 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 GDF15Q99988 308 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 LBHD1Q9BQE6 289 aaPredicted RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 WDR18Q9BV38 432 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 SENP6Q9GZR1 1112 aaPredicted RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 CCDC8Q9H0W5 538 aaPredicted RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 PIH1D3Q9NQM4 214 aaKnown RBP10.08□□□□□ -0.8
SNF8-204ENST00000506104 MORF4L1Q9UBU8 362 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 IVNS1ABPQ9Y6Y0 642 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 FPGT-TNNI3KV9GXZ4 949 aa10.08□□□□□ -0.8
SNF8-204ENST00000506104 COL2A1P02458 1487 aaPredicted RBP10.07□□□□□ -0.8
SNF8-204ENST00000506104 MPHOSPH10O00566 681 aaKnown RBP10.07□□□□□ -0.8
SNF8-204ENST00000506104 GLRX3O76003 335 aaKnown RBP10.07□□□□□ -0.8
SNF8-204ENST00000506104 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
SNF8-204ENST00000506104 TRIM27P14373 513 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 CCNA1P78396 465 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 ATP2B2Q01814 1243 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 MTX1Q13505 466 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 MFSD14CQ5VZR4 134 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
SNF8-204ENST00000506104 TRMT44Q8IYL2 757 aaKnown RBP10.07□□□□□ -0.8
SNF8-204ENST00000506104 TMEM57Q8N5G2 664 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 MAGEB6Q8N7X4 407 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 ARHGAP45Q92619 1136 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 APBA2Q99767 749 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 DNAJC18Q9H819 358 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 CABP5Q9NP86 173 aa10.07□□□□□ -0.8
SNF8-204ENST00000506104 RBPJLQ9UBG7 517 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms