RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 KIAA2012Q0VF49 1180 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 NTRK3Q16288 839 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 RTN1Q16799 776 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 L1TD1Q5T7N2 865 aaKnown RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 ZNF654Q8IZM8 581 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 ZNF444Q8N0Y2 327 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 STK11IPQ8N1F8 1099 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 CERS5Q8N5B7 392 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 FANCBQ8NB91 859 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 FBXO18Q8NFZ0 1043 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 FBXW7Q969H0 707 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 SYAP1Q96A49 352 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 CHAMP1Q96JM3 812 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 ZNF396Q96N95 335 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 ZKSCAN3Q9BRR0 538 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 GZF1Q9H116 711 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 CFAP45Q9UL16 551 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
COL4A5-208ENST00000505728 DAGLAQ9Y4D2 1042 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 MYH1P12882 1939 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
COL4A5-208ENST00000505728 ELP1O95163 1332 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 STK36Q9NRP7 1315 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 USP17L3A6NCW0 530 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 USP17L4A6NCW7 530 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 ECE2O60344 883 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 DDAH1O94760 285 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 FMNL1O95466 1100 aaPredicted RBP9.37□□□□□ -0.91
COL4A5-208ENST00000505728 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 IFIT1BQ5T764 474 aaKnown RBP9.37□□□□□ -0.91
COL4A5-208ENST00000505728 SOGA3Q5TF21 947 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 USP17L1Q7RTZ2 530 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 MICU3Q86XE3 530 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 RAB11FIP4Q86YS3 637 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 MAPKAPK5Q8IW41 473 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 ENAHQ8N8S7 591 aaPredicted RBP9.37□□□□□ -0.91
COL4A5-208ENST00000505728 GPT2Q8TD30 523 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 TEKT1Q969V4 418 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 PSMD1Q99460 953 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 MKNK2Q9HBH9 465 aa9.37□□□□□ -0.91
COL4A5-208ENST00000505728 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
COL4A5-208ENST00000505728 NAV1Q8NEY1 1877 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 TSPY2A6NKD2 308 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 SMIM22K7EJ46 135 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 FIBPO43427 364 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 PRDM1O75626 825 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 ZNF445P59923 1031 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 TFAP4Q01664 338 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 DACT2Q5SW24 774 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 COL13A1Q5TAT6 717 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-208ENST00000505728 C16orf86Q6ZW13 317 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 BRAPQ7Z569 592 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 TTC6Q86TZ1 520 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 CRACR2BQ8N4Y2 399 aaPredicted RBP9.36□□□□□ -0.91
COL4A5-208ENST00000505728 MAP3K14Q99558 947 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 USP40Q9NVE5 1235 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 TAOK2Q9UL54 1235 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 SNED1Q8TER0 1413 aa9.36□□□□□ -0.91
COL4A5-208ENST00000505728 FOCADQ5VW36 1801 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 FLT1P17948 1338 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 ADAMTSL1Q8N6G6 1762 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 MYH6P13533 1939 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 GOLGA6L3A6NEY3 463 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 GADD45BO75293 160 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-208ENST00000505728 NPM3O75607 178 aaKnown RBP9.35□□□□□ -0.91
COL4A5-208ENST00000505728 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-208ENST00000505728 DEXIO95424 95 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 POTEJP0CG39 1038 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 RXRAP19793 462 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 CRKP46108 304 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 CDK8P49336 464 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 PLCD1P51178 756 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 TRIM29Q14134 588 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 AOC3Q16853 763 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 FAM47AQ5JRC9 791 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 CAVIN1Q6NZI2 390 aaKnown RBP9.35□□□□□ -0.91
COL4A5-208ENST00000505728 CCDC144CPQ8IYA2 1237 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 NEDD1Q8NHV4 660 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 LEO1Q8WVC0 666 aaPredicted RBP9.35□□□□□ -0.91
COL4A5-208ENST00000505728 DYNLL2Q96FJ2 89 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 ZDHHC15Q96MV8 337 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 MYL10Q9BUA6 226 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 SLC26A6Q9BXS9 759 aa9.35□□□□□ -0.91
COL4A5-208ENST00000505728 RNF26Q9BY78 433 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms