RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 FAM204AQ9H8W3 233 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 ZNF609O15014 1411 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 VWA3AA6NCI4 1184 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 TRIM21P19474 475 aaKnown RBP9.03□□□□□ -0.96
PROM1-206ENST00000505450 CTDSPL2Q05D32 466 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 TXNRD1Q16881 649 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 USPL1Q5W0Q7 1092 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 CNGA4Q8IV77 575 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 BLZF1Q9H2G9 400 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 CCDC196A0A1B0GTZ2 297 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 MACROD2A1Z1Q3 448 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 TEX33O43247 280 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 KCNQ2O43526 872 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 LIG3P49916 1009 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 REXO1L1PQ8IX06 675 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 CTAGE1Q96RT6 745 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 PIK3C2BO00750 1634 aa9.03□□□□□ -0.96
PROM1-206ENST00000505450 SASH3O75995 380 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 STIM1Q13586 685 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 SPA17Q15506 151 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 TTC19Q6DKK2 380 aaPredicted RBP9.02□□□□□ -0.96
PROM1-206ENST00000505450 NCAPH2Q6IBW4 605 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 SHC4Q6S5L8 630 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 TTLL7Q6ZT98 887 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 FCHSD1Q86WN1 690 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 INCENPQ9NQS7 918 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 TRMT112Q9UI30 125 aaKnown RBP9.02□□□□□ -0.96
PROM1-206ENST00000505450 SYNRGQ9UMZ2 1314 aa9.02□□□□□ -0.96
PROM1-206ENST00000505450 MARCH6O60337 910 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 N4BP1O75113 896 aaKnown RBP9.02□□□□□ -0.97
PROM1-206ENST00000505450 EXOSC10Q01780 885 aaKnown RBP9.02□□□□□ -0.97
PROM1-206ENST00000505450 PUS7LQ9H0K6 701 aaKnown RBP9.02□□□□□ -0.97
PROM1-206ENST00000505450 CASP8Q14790 479 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 SLC4A8Q2Y0W8 1093 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 TANGO6Q9C0B7 1094 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 NEURL4Q96JN8 1562 aa9.02□□□□□ -0.97
PROM1-206ENST00000505450 PDE4BQ07343 736 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 NR5A1Q13285 461 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 DPY19L2Q6NUT2 758 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 MIGA1Q8NAN2 632 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 FAM76AQ8TAV0 307 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 MRPL44Q9H9J2 332 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 TTF2Q9UNY4 1162 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 NIP7Q9Y221 180 aaKnown RBP eCLIP9.01□□□□□ -0.97
PROM1-206ENST00000505450 LUC7L2Q9Y383 392 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MRFAP1Q9Y605 127 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 ATP2C2O75185 946 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 TFRCP02786 760 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MTIF2P46199 727 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MAP3K9P80192 1104 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 MRPS25P82663 173 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MAP3K12Q12852 859 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 NCAPHQ15003 741 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 NOSTRINQ8IVI9 506 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 LCMT1Q9UIC8 334 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MCM3P25205 808 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 NLRP5P59047 1200 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 RILPL1Q5EBL4 403 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 TRIM65Q6PJ69 517 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 APOA5Q6Q788 366 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 GNL3LQ9NVN8 582 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 PCDH11XQ9BZA7 1347 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 PCDH11YQ9BZA8 1340 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 PRR29P0C7W0 189 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 ERCC3P19447 782 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 USP8P40818 1118 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 CCDC96Q2M329 555 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 ODF2Q5BJF6 829 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 METTL16Q86W50 562 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 PLBD2Q8NHP8 589 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 PPM1EQ8WY54 764 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 BPIFA3Q9BQP9 254 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 SLC52A2Q9HAB3 445 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MYO6Q9UM54 1294 aa9.01□□□□□ -0.97
PROM1-206ENST00000505450 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
PROM1-206ENST00000505450 MROH7-TTC4A0A0A0MT08 1334 aa9□□□□□ -0.97
PROM1-206ENST00000505450 SH3TC1Q8TE82 1336 aa9□□□□□ -0.97
PROM1-206ENST00000505450 CCT5P48643 541 aa9□□□□□ -0.97
PROM1-206ENST00000505450 VPS72Q15906 364 aa9□□□□□ -0.97
PROM1-206ENST00000505450 IQCEQ6IPM2 695 aa9□□□□□ -0.97
PROM1-206ENST00000505450 TMTC1Q8IUR5 882 aa9□□□□□ -0.97
PROM1-206ENST00000505450 FUT8Q9BYC5 575 aa9□□□□□ -0.97
PROM1-206ENST00000505450 GOLGA6CA6NDK9 693 aa9□□□□□ -0.97
PROM1-206ENST00000505450 RNF40O75150 1001 aa9□□□□□ -0.97
PROM1-206ENST00000505450 CAPN15O75808 1086 aa9□□□□□ -0.97
PROM1-206ENST00000505450 MBD4O95243 580 aa9□□□□□ -0.97
PROM1-206ENST00000505450 GOLGA6DP0CG33 693 aa9□□□□□ -0.97
PROM1-206ENST00000505450 PAFAH1B1P43034 410 aa9□□□□□ -0.97
PROM1-206ENST00000505450 FMR1Q06787 632 aaKnown RBP eCLIP9□□□□□ -0.97
PROM1-206ENST00000505450 SND1Q7KZF4 910 aaKnown RBP eCLIP9□□□□□ -0.97
PROM1-206ENST00000505450 GNL3Q9BVP2 549 aaKnown RBP eCLIP9□□□□□ -0.97
PROM1-206ENST00000505450 GOLGA6AQ9NYA3 693 aa9□□□□□ -0.97
PROM1-206ENST00000505450 VPS54Q9P1Q0 977 aa9□□□□□ -0.97
PROM1-206ENST00000505450 BCCIPQ9P287 314 aaKnown RBP eCLIP9□□□□□ -0.97
PROM1-206ENST00000505450 JRKLQ9Y4A0 524 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms