RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 IQCA1LA6NCM1 817 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 F11P03951 625 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 GPSM2P81274 684 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 EXOSC9Q06265 439 aaKnown RBP6.23□□□□□ -1.41
CDH9-203ENST00000505045 CXCL9Q07325 125 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 UBAP2LQ14157 1087 aaKnown RBP6.23□□□□□ -1.41
CDH9-203ENST00000505045 C4orf17Q53FE4 359 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 MAP1SQ66K74 1059 aaPredicted RBP6.23□□□□□ -1.41
CDH9-203ENST00000505045 LDHDQ86WU2 507 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 SP8Q8IXZ3 490 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 NIM1KQ8IY84 436 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 ZNF295-AS1Q8N0V1 137 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 JDP2Q8WYK2 163 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 POLLQ9UGP5 575 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 HACL1Q9UJ83 578 aa6.23□□□□□ -1.41
CDH9-203ENST00000505045 NEURL1BA8MQ27 555 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 H7C1W4 665 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 VAMP4O75379 141 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 BBOX1O75936 387 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 RAD17O75943 681 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 EGFRP00533 1210 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 INHAP05111 366 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 PCCAP05165 728 aaPredicted RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 KSR2Q6VAB6 950 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 CCDC191Q8NCU4 936 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 ADAMTS19Q8TE59 1207 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 GAS2L1Q99501 681 aaPredicted RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 DBNDD1Q9H9R9 158 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 KCNQ5Q9NR82 932 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 CWC25Q9NXE8 425 aaPredicted RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 CENPFP49454 3210 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 CDHR2Q9BYE9 1310 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 TMEM229AB2RXF0 380 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 F6X3S4 739 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 GMPSP49915 693 aaPredicted RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 GDF10P55107 478 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 CASP7P55210 303 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 EIF6P56537 245 aaKnown RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 TMEM132AQ24JP5 1023 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 LYPD4Q6UWN0 246 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 RIPOR1Q6ZS17 1223 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 UBE3BQ7Z3V4 1068 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 JMYQ8N9B5 988 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 TRPM4Q8TD43 1214 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 STK31Q9BXU1 1019 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 GREM2Q9H772 168 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 GPRC5DQ9NZD1 345 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 MKRN1Q9UHC7 482 aaKnown RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 ZNRF3Q9ULT6 936 aa6.22□□□□□ -1.41
CDH9-203ENST00000505045 NSFL1CQ9UNZ2 370 aaKnown RBP6.22□□□□□ -1.41
CDH9-203ENST00000505045 CNTNAP5Q8WYK1 1306 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 GPR25O00155 361 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 TRAF5O00463 557 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 PDE8AO60658 829 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 DDX58O95786 925 aaKnown RBP6.21□□□□□ -1.42
CDH9-203ENST00000505045 CTSWP56202 376 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 FKBP5Q13451 457 aaPredicted RBP6.21□□□□□ -1.42
CDH9-203ENST00000505045 ZMYM1Q5SVZ6 1142 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 DLK2Q6UY11 383 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 WDR63Q8IWG1 891 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 TBC1D16Q8TBP0 767 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 RHBDD1Q8TEB9 315 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 GTPBP3Q969Y2 492 aaKnown RBP6.21□□□□□ -1.42
CDH9-203ENST00000505045 HTTP42858 3142 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 CNTNAP1P78357 1384 aa6.21□□□□□ -1.42
CDH9-203ENST00000505045 A0A1B0GTH6 734 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 POM121CA8CG34 1229 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 UFL1O94874 794 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 KLRK1P26718 216 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 RPS8P62241 208 aaKnown RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 GCKRQ14397 625 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 MTFR1Q15390 333 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 CNTROBQ8N137 903 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 TTLL11Q8NHH1 800 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 NUCKS1Q9H1E3 243 aaKnown RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 BRCA2P51587 3418 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 PSMD14O00487 310 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 LZTS3O60299 673 aaPredicted RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 ECE2O60344 883 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 MSX1P28360 303 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 PHKA2P46019 1235 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 MAP3K10Q02779 954 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 TLR1Q15399 786 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 CCDC152Q4G0S7 254 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 GNASQ5JWF2 1037 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 CIAPIN1Q6FI81 312 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 TMEM214Q6NUQ4 689 aaKnown RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 SUPT20HQ8NEM7 779 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 DNAAF4Q8WXU2 420 aa6.2□□□□□ -1.42
CDH9-203ENST00000505045 IQSEC3Q9UPP2 1182 aaPredicted RBP6.2□□□□□ -1.42
CDH9-203ENST00000505045 ASTN2O75129 1339 aaPredicted RBP6.19□□□□□ -1.42
CDH9-203ENST00000505045 SNAP23O00161 211 aa6.19□□□□□ -1.42
CDH9-203ENST00000505045 CELA2BP08218 269 aaPredicted RBP6.19□□□□□ -1.42
CDH9-203ENST00000505045 SKIP12755 728 aa6.19□□□□□ -1.42
CDH9-203ENST00000505045 LMOD1P29536 600 aaPredicted RBP6.19□□□□□ -1.42
CDH9-203ENST00000505045 SMTNP53814 917 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms