RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 IRF6O14896 467 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 APPP05067 770 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 GSPT1P15170 499 aaKnown RBP24.18■■□□□ 1.46
HERC6-205ENST00000504905 PTPRAP18433 802 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 SDSP20132 328 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 RRP1BQ14684 758 aaKnown RBP24.18■■□□□ 1.46
HERC6-205ENST00000504905 CCDC129Q6ZRS4 1044 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 FAM227BQ96M60 508 aa24.18■■□□□ 1.46
HERC6-205ENST00000504905 PHIPQ8WWQ0 1821 aa24.17■■□□□ 1.46
HERC6-205ENST00000504905 A0A0D9SFI3 127 aa24.17■■□□□ 1.46
HERC6-205ENST00000504905 PATL2C9JE40 543 aaKnown RBP24.17■■□□□ 1.46
HERC6-205ENST00000504905 NMIQ13287 307 aaPredicted RBP24.17■■□□□ 1.46
HERC6-205ENST00000504905 SNAPC2Q13487 334 aa24.17■■□□□ 1.46
HERC6-205ENST00000504905 MCMDC2Q4G0Z9 681 aa24.17■■□□□ 1.46
HERC6-205ENST00000504905 IFNL1Q8IU54 200 aa24.17■■□□□ 1.46
HERC6-205ENST00000504905 ARPP21Q9UBL0 812 aaPredicted RBP24.17■■□□□ 1.46
HERC6-205ENST00000504905 ZHX2Q9Y6X8 837 aa24.17■■□□□ 1.46
HERC6-205ENST00000504905 HIP1O00291 1037 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 TDO2P48775 406 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 EVX2Q03828 476 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 GABPAQ06546 454 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 C12orf60Q5U649 245 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 TATDN1Q6P1N9 297 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 CTR9Q6PD62 1173 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 MS4A4AQ96JQ5 239 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 NACAP1Q9BZK3 213 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 DIAPH3Q9NSV4 1193 aa24.16■■□□□ 1.46
HERC6-205ENST00000504905 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.16■■□□□ 1.46
HERC6-205ENST00000504905 HTTP42858 3142 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 CYP2D7A0A087X1C5 515 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 CCL15-CCL14A0A0B4J2E2 113 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 GDF11O95390 407 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 ASNSP08243 561 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 CCL15Q16663 113 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 EPB41L4AQ9HCS5 686 aaPredicted RBP24.15■■□□□ 1.46
HERC6-205ENST00000504905 SWAP70Q9UH65 585 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 TAOK2Q9UL54 1235 aa24.15■■□□□ 1.46
HERC6-205ENST00000504905 TESPA1A2RU30 521 aaPredicted RBP24.14■■□□□ 1.45
HERC6-205ENST00000504905 CETPP11597 493 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 SHMT1P34896 483 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 CERKLQ49MI3 558 aaPredicted RBP24.14■■□□□ 1.45
HERC6-205ENST00000504905 SBK1Q52WX2 424 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 OTUD7BQ6GQQ9 843 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 IFNL3Q8IZI9 196 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 DYNLL2Q96FJ2 89 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 GINM1Q9NU53 330 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 PPP4R2Q9NY27 417 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 KCNH4Q9UQ05 1017 aa24.14■■□□□ 1.45
HERC6-205ENST00000504905 USP17L5A8MUK1 530 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 OTOP1Q7RTM1 612 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 CCDC84Q86UT8 332 aaPredicted RBP24.13■■□□□ 1.45
HERC6-205ENST00000504905 BRI3BPQ8WY22 251 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 TBC1D2Q9BYX2 928 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 AFG3L2Q9Y4W6 797 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 TRIM17Q9Y577 477 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 PTPRFP10586 1907 aa24.13■■□□□ 1.45
HERC6-205ENST00000504905 MINDY4BA8MYZ0 360 aa24.12■■□□□ 1.45
HERC6-205ENST00000504905 IGF2BP3O00425 579 aaKnown RBP eCLIP24.12■■□□□ 1.45
HERC6-205ENST00000504905 CXCL11O14625 94 aa24.12■■□□□ 1.45
HERC6-205ENST00000504905 MFAP1P55081 439 aaKnown RBP24.12■■□□□ 1.45
HERC6-205ENST00000504905 CWC27Q6UX04 472 aaKnown RBP24.12■■□□□ 1.45
HERC6-205ENST00000504905 SLC44A5Q8NCS7 719 aa24.12■■□□□ 1.45
HERC6-205ENST00000504905 NAPBQ9H115 298 aa24.12■■□□□ 1.45
HERC6-205ENST00000504905 ZBTB21Q9ULJ3 1066 aa24.12■■□□□ 1.45
HERC6-205ENST00000504905 CCDC171Q6TFL3 1326 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 TRIM75PA6NK02 468 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 GH2P01242 217 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 JAG1P78504 1218 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 ABCB5Q2M3G0 1257 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 SHROOM1Q2M3G4 852 aaPredicted RBP24.11■■□□□ 1.45
HERC6-205ENST00000504905 ZNF589Q86UQ0 364 aaPredicted RBP24.11■■□□□ 1.45
HERC6-205ENST00000504905 SKAP1Q86WV1 359 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 PTPN18Q99952 460 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 AS3MTQ9HBK9 375 aa24.11■■□□□ 1.45
HERC6-205ENST00000504905 SMIM22K7EJ46 135 aa24.1■■□□□ 1.45
HERC6-205ENST00000504905 CDK8P49336 464 aa24.1■■□□□ 1.45
HERC6-205ENST00000504905 VPS53Q5VIR6 699 aa24.1■■□□□ 1.45
HERC6-205ENST00000504905 C16orf86Q6ZW13 317 aa24.1■■□□□ 1.45
HERC6-205ENST00000504905 ZNF280CQ8ND82 737 aa24.1■■□□□ 1.45
HERC6-205ENST00000504905 CABP5Q9NP86 173 aa24.1■■□□□ 1.45
HERC6-205ENST00000504905 ERO1AQ96HE7 468 aa24.09■■□□□ 1.45
HERC6-205ENST00000504905 ROBO3Q96MS0 1386 aa24.08■■□□□ 1.45
HERC6-205ENST00000504905 A0A0G2JLL6 359 aaPredicted RBP24.08■■□□□ 1.45
HERC6-205ENST00000504905 MPHOSPH10O00566 681 aaKnown RBP24.08■■□□□ 1.45
HERC6-205ENST00000504905 FOXP2O15409 715 aa24.08■■□□□ 1.45
HERC6-205ENST00000504905 SPP2Q13103 211 aa24.08■■□□□ 1.45
HERC6-205ENST00000504905 PRRT2Q7Z6L0 340 aaPredicted RBP24.08■■□□□ 1.45
HERC6-205ENST00000504905 PTPN22Q9Y2R2 807 aa24.08■■□□□ 1.45
HERC6-205ENST00000504905 MKI67P46013 3256 aaKnown RBP24.08■■□□□ 1.44
HERC6-205ENST00000504905 POTEFA5A3E0 1075 aa24.07■■□□□ 1.44
HERC6-205ENST00000504905 BTBD19C9JJ37 291 aa24.07■■□□□ 1.44
HERC6-205ENST00000504905 HSPD1P10809 573 aaKnown RBP24.07■■□□□ 1.44
HERC6-205ENST00000504905 RAB3GAP1Q15042 981 aa24.07■■□□□ 1.44
HERC6-205ENST00000504905 FASTKD5Q7L8L6 764 aaKnown RBP24.07■■□□□ 1.44
HERC6-205ENST00000504905 STK11IPQ8N1F8 1099 aa24.07■■□□□ 1.44
HERC6-205ENST00000504905 FAM43AQ8N2R8 423 aa24.07■■□□□ 1.44
HERC6-205ENST00000504905 WDR18Q9BV38 432 aa24.07■■□□□ 1.44
HERC6-205ENST00000504905 ALX1Q15699 326 aa24.06■■□□□ 1.44
HERC6-205ENST00000504905 GADL1Q6ZQY3 521 aa24.06■■□□□ 1.44
HERC6-205ENST00000504905 CCDC17Q96LX7 622 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms