RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 C11orf49Q9H6J7 331 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 CWC22Q9HCG8 908 aaKnown RBP14.84□□□□□ -0.03
NEDD9-209ENST00000504634 FLT1P17948 1338 aa14.84□□□□□ -0.03
NEDD9-209ENST00000504634 GDF11O95390 407 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 MAPK4P31152 587 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 PPP4CP60510 307 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 TNNI3KQ59H18 835 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 DBNDD2Q9BQY9 259 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 GINM1Q9NU53 330 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
NEDD9-209ENST00000504634 PALD1Q9ULE6 856 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 ZBTB21Q9ULJ3 1066 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 FPGT-TNNI3KV9GXZ4 949 aa14.83□□□□□ -0.04
NEDD9-209ENST00000504634 MGAMO43451 1857 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 PEX10O60683 326 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 XRCC5P13010 732 aaKnown RBP14.82□□□□□ -0.04
NEDD9-209ENST00000504634 ZKSCAN1P17029 563 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-209ENST00000504634 SYN1P17600 705 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 BMP8BP34820 402 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 TRMT44Q8IYL2 757 aaKnown RBP14.82□□□□□ -0.04
NEDD9-209ENST00000504634 GTF3C2Q8WUA4 911 aaPredicted RBP14.82□□□□□ -0.04
NEDD9-209ENST00000504634 GDF15Q99988 308 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 PAGR1Q9BTK6 254 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 TXNRD2Q9NNW7 524 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 OGDHLQ9ULD0 1010 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 TNNQ9UQP3 1299 aa14.82□□□□□ -0.04
NEDD9-209ENST00000504634 CUL9Q8IWT3 2517 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 SURF6O75683 361 aaKnown RBP14.81□□□□□ -0.04
NEDD9-209ENST00000504634 BCAR3O75815 825 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 CYP2E1P05181 493 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-209ENST00000504634 RGS2P41220 211 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 ERVK-9P63128 1117 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 ERVK-24P63145 666 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 JAG1P78504 1218 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
NEDD9-209ENST00000504634 MAP3K21Q5TCX8 1036 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 USP17L2Q6R6M4 530 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 ADGRA1Q86SQ6 560 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 RBPJLQ9UBG7 517 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 LAMA3Q16787 3333 aa14.81□□□□□ -0.04
NEDD9-209ENST00000504634 CYP7A1P22680 504 aa14.8□□□□□ -0.04
NEDD9-209ENST00000504634 ZAP70P43403 619 aa14.8□□□□□ -0.04
NEDD9-209ENST00000504634 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
NEDD9-209ENST00000504634 GPR142Q7Z601 462 aa14.8□□□□□ -0.04
NEDD9-209ENST00000504634 PLEKHH3Q7Z736 793 aa14.8□□□□□ -0.04
NEDD9-209ENST00000504634 METTL16Q86W50 562 aaKnown RBP14.8□□□□□ -0.04
NEDD9-209ENST00000504634 FEZ1Q99689 392 aa14.8□□□□□ -0.04
NEDD9-209ENST00000504634 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
NEDD9-209ENST00000504634 IGSF3O75054 1194 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 IDH1O75874 414 aaKnown RBP14.79□□□□□ -0.04
NEDD9-209ENST00000504634 GH2P01242 217 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 PTPRFP10586 1907 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
NEDD9-209ENST00000504634 USP5P45974 858 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 DYNLL1P63167 89 aaKnown RBP14.79□□□□□ -0.04
NEDD9-209ENST00000504634 CCNA1P78396 465 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 CACNB2Q08289 660 aaPredicted RBP14.79□□□□□ -0.04
NEDD9-209ENST00000504634 Q3C1V9 767 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 WDR78Q5VTH9 848 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 TMEM57Q8N5G2 664 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 UBE2OQ9C0C9 1292 aaKnown RBP14.79□□□□□ -0.04
NEDD9-209ENST00000504634 PORCNQ9H237 461 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 PIH1D3Q9NQM4 214 aaKnown RBP14.79□□□□□ -0.04
NEDD9-209ENST00000504634 EMILIN3Q9NT22 766 aa14.79□□□□□ -0.04
NEDD9-209ENST00000504634 GLRX3O76003 335 aaKnown RBP14.78□□□□□ -0.04
NEDD9-209ENST00000504634 POLA2Q14181 598 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 RAB3GAP1Q15042 981 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 ZYXQ15942 572 aaKnown RBP14.78□□□□□ -0.04
NEDD9-209ENST00000504634 ZKSCAN2Q63HK3 967 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 TDHQ8IZJ6 230 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 DEFB123Q8N688 67 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 MIGA1Q8NAN2 632 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 ZNF512BQ96KM6 892 aaPredicted RBP14.78□□□□□ -0.04
NEDD9-209ENST00000504634 APBA2Q99767 749 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 LOC285556D6RIA3 1793 aa14.78□□□□□ -0.04
NEDD9-209ENST00000504634 PFASO15067 1338 aa14.77□□□□□ -0.04
NEDD9-209ENST00000504634 USP17L15C9J2P7 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L13C9JLJ4 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L11C9JVI0 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L18D6R9N7 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L22D6RA61 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L17D6RBQ6 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L19D6RCP7 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L20D6RJB6 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 CCND3P30281 292 aaPredicted RBP14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP14P54578 494 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 ATP8B2P98198 1209 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP17L24Q0WX57 530 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 CCL14Q16627 93 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 MORN1Q5T089 497 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 CERS3Q8IU89 383 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 USP6NLQ92738 828 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 CCDC8Q9H0W5 538 aaPredicted RBP14.77□□□□□ -0.05
NEDD9-209ENST00000504634 C1orf115Q9H7X2 142 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 SERPINB13Q9UIV8 391 aa14.77□□□□□ -0.05
NEDD9-209ENST00000504634 DBNLQ9UJU6 430 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms