RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 NR2E3Q9Y5X4 410 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 MGAMO43451 1857 aa11.3□□□□□ -0.6
DHFR-202ENST00000504396 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
DHFR-202ENST00000504396 GJB1P08034 283 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 PRDX5P30044 214 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
DHFR-202ENST00000504396 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
DHFR-202ENST00000504396 LPIN2Q92539 896 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 SIL1Q9H173 461 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 USP40Q9NVE5 1235 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 GNL3LQ9NVN8 582 aaKnown RBP11.29□□□□□ -0.6
DHFR-202ENST00000504396 PTPRCP08575 1304 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 ADGRA2Q96PE1 1338 aa11.29□□□□□ -0.6
DHFR-202ENST00000504396 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
DHFR-202ENST00000504396 UNC93B1Q9H1C4 597 aa11.28□□□□□ -0.6
DHFR-202ENST00000504396 GABRQQ9UN88 632 aa11.28□□□□□ -0.6
DHFR-202ENST00000504396 ZHX2Q9Y6X8 837 aa11.28□□□□□ -0.6
DHFR-202ENST00000504396 EYA2O00167 538 aa11.27□□□□□ -0.6
DHFR-202ENST00000504396 TNPO2O14787 897 aaKnown RBP11.27□□□□□ -0.6
DHFR-202ENST00000504396 ADCY3O60266 1144 aa11.27□□□□□ -0.6
DHFR-202ENST00000504396 ELNP15502 786 aa11.27□□□□□ -0.6
DHFR-202ENST00000504396 FGFR2P21802 821 aa11.27□□□□□ -0.6
DHFR-202ENST00000504396 DNAJB2P25686 324 aa11.27□□□□□ -0.6
DHFR-202ENST00000504396 FASTKD5Q7L8L6 764 aaKnown RBP11.27□□□□□ -0.6
DHFR-202ENST00000504396 ZNF112Q9UJU3 913 aa11.27□□□□□ -0.6
DHFR-202ENST00000504396 LRRFIP2Q9Y608 721 aaKnown RBP11.27□□□□□ -0.6
DHFR-202ENST00000504396 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 TRIM75PA6NK02 468 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 CXCL11O14625 94 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 TFRCP02786 760 aaKnown RBP11.26□□□□□ -0.61
DHFR-202ENST00000504396 INHAP05111 366 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 BCRP11274 1271 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 CAPN2P17655 700 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 FLT3LGP49771 235 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 PICALMQ13492 652 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 ATP2B3Q16720 1220 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 DZIP1Q86YF9 867 aaKnown RBP11.26□□□□□ -0.61
DHFR-202ENST00000504396 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 DOCK1Q14185 1865 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
DHFR-202ENST00000504396 RGS3P49796 1198 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 MOGSQ13724 837 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
DHFR-202ENST00000504396 ZFPM1Q8IX07 1006 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 USP44Q9H0E7 712 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
DHFR-202ENST00000504396 TRIOBPQ9H2D6 2365 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 MYH2Q9UKX2 1941 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
DHFR-202ENST00000504396 SGPL1O95470 568 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 PTPRAP18433 802 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 SLF2Q8IX21 1173 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 ZGPATQ8N5A5 531 aaKnown RBP11.25□□□□□ -0.61
DHFR-202ENST00000504396 ANKRD13CQ8N6S4 541 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 SLC17A8Q8NDX2 589 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 COA7Q96BR5 231 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 ABCF2Q9UG63 623 aa11.25□□□□□ -0.61
DHFR-202ENST00000504396 ZNF521Q96K83 1311 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 SALL1Q9NSC2 1324 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 CEP290O15078 2479 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 OATP04181 439 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 UBTFL1P0CB47 393 aaPredicted RBP11.24□□□□□ -0.61
DHFR-202ENST00000504396 PHKA1P46020 1223 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 UBE2Q1Q7Z7E8 422 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.24□□□□□ -0.61
DHFR-202ENST00000504396 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
DHFR-202ENST00000504396 PTPRFP10586 1907 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 PHF20L1A8MW92 1017 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 ENTPD3O75355 529 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 CIAO1O76071 339 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
DHFR-202ENST00000504396 ATG9AQ7Z3C6 839 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
DHFR-202ENST00000504396 CCDC84Q86UT8 332 aaPredicted RBP11.23□□□□□ -0.61
DHFR-202ENST00000504396 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 AFG3L2Q9Y4W6 797 aa11.23□□□□□ -0.61
DHFR-202ENST00000504396 DDTLA6NHG4 134 aaPredicted RBP11.22□□□□□ -0.61
DHFR-202ENST00000504396 DLL1O00548 723 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 CTNND1O60716 968 aaKnown RBP11.22□□□□□ -0.61
DHFR-202ENST00000504396 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 ADORA1P30542 326 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 BTDP43251 543 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.617e-18■■■■□ 26.7
DHFR-202ENST00000504396 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 PAWRQ96IZ0 340 aaKnown RBP11.22□□□□□ -0.61
DHFR-202ENST00000504396 IDI2Q9BXS1 227 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 STAP2Q9UGK3 403 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 SLC45A1Q9Y2W3 748 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 ATRNL1Q5VV63 1379 aa11.22□□□□□ -0.61
DHFR-202ENST00000504396 PHIPQ8WWQ0 1821 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 FAM196BA6NMK8 535 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 E9PSI1 815 aa11.21□□□□□ -0.61
DHFR-202ENST00000504396 IL15P40933 162 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms