RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 HID1Q8IV36 788 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 FBXO27Q8NI29 283 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 NETO1Q8TDF5 533 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 BCL7CQ8WUZ0 217 aaPredicted RBP6.91□□□□□ -1.3
RFC1-205ENST00000502991 RHOVQ96L33 236 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 MIPEPQ99797 713 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 CHMP4AQ9BY43 222 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 FOXQ1Q9C009 403 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 TJP2Q9UDY2 1190 aa6.91□□□□□ -1.3
RFC1-205ENST00000502991 FAM221AA4D161 298 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 CILPO75339 1184 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 VAMP1P23763 118 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 RPL6Q02878 288 aaKnown RBP6.9□□□□□ -1.3
RFC1-205ENST00000502991 LMNB2Q03252 620 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 LDLRAD1Q5T700 205 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 WFDC3Q8IUB2 231 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 TP53INP2Q8IXH6 220 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 GOLM1Q8NBJ4 401 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 KCT2Q8NC54 265 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 RSRP1Q9BUV0 290 aa6.9□□□□□ -1.3
RFC1-205ENST00000502991 PAK6Q9NQU5 681 aaPredicted RBP6.9□□□□□ -1.3
RFC1-205ENST00000502991 PRR33A8MZF0 331 aa6.89□□□□□ -1.31
RFC1-205ENST00000502991 TLR3O15455 904 aaKnown RBP6.89□□□□□ -1.31
RFC1-205ENST00000502991 GRIN3BO60391 1043 aa6.89□□□□□ -1.31
RFC1-205ENST00000502991 CEACAM5P06731 702 aa6.89□□□□□ -1.31
RFC1-205ENST00000502991 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
RFC1-205ENST00000502991 ERMP1Q7Z2K6 904 aa6.89□□□□□ -1.31
RFC1-205ENST00000502991 UPK3BL1B0FP48 263 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 UPK3BL2E5RIL1 263 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 GARTP22102 1010 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 ZC3H6P61129 1189 aaKnown RBP6.88□□□□□ -1.31
RFC1-205ENST00000502991 LETMD1Q6P1Q0 360 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 FBXL19Q6PCT2 694 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 GATAD2BQ8WXI9 593 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 ACSF2Q96CM8 615 aaPredicted RBP6.88□□□□□ -1.31
RFC1-205ENST00000502991 TMEM87BQ96K49 555 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 GGT7Q9UJ14 662 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 TPX2Q9ULW0 747 aaKnown RBP6.88□□□□□ -1.31
RFC1-205ENST00000502991 SLC5A6Q9Y289 635 aa6.88□□□□□ -1.31
RFC1-205ENST00000502991 PPM1GO15355 546 aaPredicted RBP6.87□□□□□ -1.31
RFC1-205ENST00000502991 BPNT1O95861 308 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 CST3P01034 146 aaPredicted RBP6.87□□□□□ -1.31
RFC1-205ENST00000502991 CD8BP10966 210 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 PLCG1P19174 1290 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 AOC3Q16853 763 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 NKPD1Q17RQ9 610 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 CDH24Q86UP0 819 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 SPACA3Q8IXA5 215 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 PRDM5Q9NQX1 630 aaPredicted RBP6.87□□□□□ -1.31
RFC1-205ENST00000502991 GTF2IRD1Q9UHL9 959 aa6.87□□□□□ -1.31
RFC1-205ENST00000502991 POLR3KQ9Y2Y1 108 aaPredicted RBP6.87□□□□□ -1.31
RFC1-205ENST00000502991 CAP2P40123 477 aa6.86□□□□□ -1.31
RFC1-205ENST00000502991 IRAK1P51617 712 aa6.86□□□□□ -1.31
RFC1-205ENST00000502991 IFI16Q16666 785 aaKnown RBP6.86□□□□□ -1.31
RFC1-205ENST00000502991 CCDC84Q86UT8 332 aaPredicted RBP6.86□□□□□ -1.31
RFC1-205ENST00000502991 FBXL18Q96ME1 805 aa6.86□□□□□ -1.31
RFC1-205ENST00000502991 BACH2Q9BYV9 841 aa6.86□□□□□ -1.31
RFC1-205ENST00000502991 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
RFC1-205ENST00000502991 SMARCA5O60264 1052 aaPredicted RBP6.85□□□□□ -1.31
RFC1-205ENST00000502991 CBX7O95931 251 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 PDE4BQ07343 736 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 PWP1Q13610 501 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
RFC1-205ENST00000502991 MFSD2AQ8NA29 543 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 UBXN4Q92575 508 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 ADAMTS1Q9UHI8 967 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 TACC3Q9Y6A5 838 aa6.85□□□□□ -1.31
RFC1-205ENST00000502991 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
RFC1-205ENST00000502991 DNAJA2O60884 412 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 TAL1P17542 331 aaPredicted RBP6.84□□□□□ -1.31
RFC1-205ENST00000502991 ITGAEP38570 1179 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 EIF4A3P38919 411 aaKnown RBP6.84□□□□□ -1.31
RFC1-205ENST00000502991 CRKP46108 304 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 PRKCQQ04759 706 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 PLCL1Q15111 1095 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 SF3A1Q15459 793 aaKnown RBP6.84□□□□□ -1.31
RFC1-205ENST00000502991 CDKAL1Q5VV42 579 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 MCTP1Q6DN14 999 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 HS2ST1Q7LGA3 356 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 REC114Q7Z4M0 266 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 MCATQ8IVS2 390 aaKnown RBP6.84□□□□□ -1.31
RFC1-205ENST00000502991 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
RFC1-205ENST00000502991 HRASLS5Q96KN8 279 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 TNKS2Q9H2K2 1166 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 MKNK2Q9HBH9 465 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 PRDM7Q9NQW5 492 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
RFC1-205ENST00000502991 TMEM265A0A087WTH1 108 aa6.83□□□□□ -1.32
RFC1-205ENST00000502991 HTR3BO95264 441 aa6.83□□□□□ -1.32
RFC1-205ENST00000502991 SFRP5Q5T4F7 317 aa6.83□□□□□ -1.32
RFC1-205ENST00000502991 SLC6A19Q695T7 634 aa6.83□□□□□ -1.32
RFC1-205ENST00000502991 STK11IPQ8N1F8 1099 aa6.83□□□□□ -1.32
RFC1-205ENST00000502991 FAM13CQ8NE31 585 aa6.83□□□□□ -1.32
RFC1-205ENST00000502991 UBP1Q9NZI7 540 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms